Capricornis sumatraensis (Sumatran serow): 138085164
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Entry
138085164 CDS
T10522
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138085164 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138085164 (CNOT6)
Enzymes [BR:
csum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
138085164 (CNOT6)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138085164 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
138085164 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
138085164
NCBI-ProteinID:
XP_068835439
LinkDB
All DBs
Position
9:complement(2456067..2545981)
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AA seq
557 aa
AA seq
DB search
MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWVELEISGKVRSLSSSLWSLTHLTALYLSD
NSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYLEPDGTRRLLNYLLDNLAGTAKRISAEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEVSSGKPHLGTEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRSLQSSVLGEFGTIPLVLCADLNSLPDSG
VVEYLSTGEVETNHKDFKELRYNESLTNFSCNGKNGTTSGRITHGFKLKSAYESGLMPYT
NYTCDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPQVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgagccccctgaccctcggaggatgtacacaattatgtcctcc
gaggaagcagcaaatggaaagaaatctcattgggtggagcttgaaataagtggaaaagta
agaagcttaagctcatctttgtggtcactaactcacttgacagctttgtatctaagtgac
aattccctgtcccgcattccttcagacattgccaagcttcacaatctggtgtatctggac
ctgtcctctaataaaatccgaagtttaccggcagaactcggaaacatggtatcactcagg
gaactccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaggcctgaaaggaaatccacttacccaggacatattgaacctctat
ctggagccagatggaacaagaaggctactgaactatttgcttgataatttggcaggtact
gcaaaaagaatttcagcagaacagccacctccaagatcttggattatgttacaagaacca
gacagaacacggccaactgccttgttttctgtcatgtgctataatgttctttgtgataaa
tatgcgacccggcagttatatggctactgtccatcatgggcactaaattgggactacagg
aaaaaggccattattcaagaaatcttgagttgcaatgctgatatcataagtcttcaggaa
gttgaaacagaacagtattacagtttttttctggtagaactgaaagaacgtggctataat
ggattctttagtcctaaatctagagctaggacaatgtcagagcaagaaagaaaacatgtt
gatggctgtgcaatattttttaaaacagaaaaatttacattggttcagaaacacactgtt
gaatttaatcagctagcaatggcgaattcagaagggtctgaagccatgctgaacagagtc
atgacgaaagataacataggagtggctgtactgctagagcttcgaaaggaactgattgaa
gtatcatctggaaagccacatcttggaacagaaaagcagcttattctcgtggctaatgct
catatgcactgggaccctgaatactccgatgtgaagttggttcagacgatgatgttcctc
tcagaagtgaagaatattattgataaagcctcgagaagtctccagtccagtgtattagga
gagtttggaactattccactagtgttatgtgcagatcttaattctttgccggactctggt
gttgtagaatatttgagcactggtgaagtagaaacaaatcataaagactttaaggaactg
agatacaatgaaagtcttacgaacttcagctgtaatgggaaaaatgggacaaccagtgga
aggatcactcatggcttcaagttaaagagtgcctatgagagtggcctgatgccttacacc
aactacacatgtgattttaagggtataattgactacatcttctattctaaacctcagctg
aacactttaggcatcctgggacctctggaccaccattggctagttgagaacaatatcagc
ggctgcccacacccactcatcccctctgaccacttctcactttttgcacaactggagctc
ttactgcctttcctgccccaggttaatggcattcaccttcctggcaggaggtag
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