Capricornis sumatraensis (Sumatran serow): 138085284
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Entry
138085284 CDS
T10522
Symbol
SYNPO
Name
(RefSeq) synaptopodin isoform X1
KO
K21112
synaptopodin
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04530
Tight junction
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Gene cluster
GFIT
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NCBI-GeneID:
138085284
NCBI-ProteinID:
XP_068835664
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Position
9:61621255..61661258
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AA seq
924 aa
AA seq
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MLGPHLPSLPPAPSKGTSTPCTFGIPDGSYRYLALEAEESGGEEGLQGEAGLTDLEEDRV
ASRSGDKACRATQGPPQLPRALGTRPPSCSREARGVSQLDNRANQAGDTMKFQQAMTASL
SPSLGPRIAQKPALGRSTSLTEKDLNEAKARSQQIAAQLTTPPSSNSRGVQLFNRRRQRV
NEFTLESHGQRGPKSSQEPLRVPPASPTGHAPGLRLSPTSLPEPGPPRNPACQSADTGVP
SHSMEGCSEEAGLLRHLEKMASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSPPTP
PPEEVHSPAADANQNLPSAGTTLVTPASNGNHNLPATDVNQNLSAAITPQSLPLSSVQQN
SSEVQLPPNDAVPDFKPSTPCAGGQPQEPAVEVRSSTLLIDKVSAPPTTTSTFSREVTPI
SSTRPLGPDFMSSSLLIDVQLGAPVVSTEQEMSGRTTTTTPTKLYSEVHLTLAKPPSVVN
RTARPFGIQAPGSTGQMERSPMVERRHRGEKAPVPQPPSVADRSPRPQRHVMSHSPMLER
RPVAQRSPALERQPLGNFTPPPTYAETLSTAPLTSGVRSPPSYSALYPSSDPKPSHLKGQ
AVPASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEAGLE
EEPFALGAEASNFQQEPAPRDRASPADAEETVPEWASCLKSPRIQAKPKPKPNQNLSEAS
GKGAELYARRQSRMEKYVIESSGHAELARCPSPTMSLPSSWKYSTNAPGGTFRVASRSPA
RTPPASLFHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKASPRAASPAKPSSLD
LVPSLPKAALPPSPALPRPSRSYTTTGQDGLQPTTVSPTYSSDISPVSPSRAWSPRAKQA
PRPSFSTRNVGIEAQVWKPSFCFK
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcccccacctcccatccctaccaccggcacccagcaaaggcacgtctacaccc
tgcacctttgggatccctgatggcagctacaggtatctggccttggaggccgaggagagt
ggcggtgaggagggcctgcagggagaggcagggctcacagacttggaggaagaccgagtg
gccagcaggagtggggacaaggcctgcagagccacccaagggccaccacagcttcccaga
gccctgggcacccggccacccagttgctccagggaggcacgaggggtttcccagcttgac
aacagagccaatcaggctggggacaccatgaagttccagcaggcgatgacagccagcctt
agccccagcctggggcccaggattgcccagaaaccagcgctgggccggagtactagcctc
accgagaaggatctaaacgaggccaaggcaaggagccagcagatcgcagcccagctaacc
acccctcccagctccaactcccgcggagtccagctcttcaacaggcgccggcagagggtg
aacgagttcaccttggagagccacggccagagggggccgaagtctagccaggagcccctc
agagtgccccctgcaagccccacaggccatgccccggggctccgcctgagtcccacctcg
ctccctgagccaggccctccgagaaaccctgcctgccagagcgctgacacaggggtcccc
agtcacagcatggagggctgctcggaggaagccggcctgctccggcacctggagaagatg
gccagcgaggaggaggaggtgccactggtggtttatctaaaggagaatgcagccctgctg
acggccaacgggctccacctgtcccagaacagagaagcccagcagagtcccccaacccca
cctccggaggaggtccacagcccggctgcagatgccaaccaaaaccttccctcagccggc
accacacttgtcacgccagcttctaatggcaaccacaacctgccagccacagatgtcaat
cagaacctatcggcagccatcaccccacagagcctgcctctctccagcgtccaacagaat
tcttccgaggtgcagcttcctccaaatgatgcggtgccggatttcaaacccagcaccccg
tgtgctggcgggcaaccccaggagccagctgtggaggtgagatccagcacgctcctaatt
gataaggtatcagctccacctaccaccaccagcaccttctctagagaagttactcccatc
tccagcaccaggcccctgggcccagatttcatgtccagctccctgctcattgatgtccag
cttggagccccagtggtgtccacagagcaagagatgtccgggcggacaaccaccaccacg
cccaccaaactgtacagcgaggtccacctcacactggccaagcctccatccgtggtcaat
aggacggccaggccctttgggatccaggcgccgggcagcaccggtcagatggagcgaagc
cctatggtagagagacgacatcgtggggagaaggcccccgtcccccagccccccagtgtg
gcagacaggagcccccggccacagagacacgtaatgtcccacagccccatgctggagagg
aggcccgtggcacagcgaagccccgccttggagagacaacccctgggaaactttacccca
ccaccgacctatgctgagaccttgtccacagcccccctgacttccggggttaggtctccc
ccatcttattctgccctgtaccccagctctgaccccaagccttctcatctaaagggccag
gcagtccctgccagcaagacgggcattttggaggaatcgatggcccgcaggggcagccgg
aaatccatgttcaccttcgtggagaagcccaaggtgaccccgaatccagatctgctggac
ctggtacagacggctgatgagaagcgcaggcagagggaccagggggaggcgggcctggag
gaggagcccttcgcccttggggccgaggcctccaacttccagcaggagcccgcaccccgg
gacagggccagccctgccgacgctgaggagaccgtccccgagtgggcctcctgcctcaag
tcaccgcgcatccaggccaagccgaagcccaaacccaaccagaacctctcggaggcctcg
gggaagggggccgagctctacgcccgccgccagtcccggatggagaagtacgtcatcgag
tcttcgggccacgctgagctagcccgctgcccgtctcccaccatgtccctgccttcttcc
tggaagtactccaccaatgcacctggcggcaccttccgagtggcctcccggagcccggct
cggaccccgcctgcctcgctcttccatggatacctgcctgagaatggggtcctgcgtcca
gagcccaccaagcagccgccctaccaactgcggccctcccttttcgtcctctcacccatc
aaagaacctgccaaggcctcgcctagagccgcctcgcccgccaagcccagctccctggac
ctggtgcccagcctgcccaaggcggctctcccaccgtcacctgccctgcctcggccctcc
cgctcctacaccaccactggccaggacggcctccagcccaccacagtgagccccacctac
agcagtgatatctcgcctgtgtcaccctccagggcatggtctccccgagccaagcaagcc
cccaggccctccttctccacccggaatgtggggatcgaggctcaggtgtggaagccatcc
ttctgcttcaagtaa
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