Capricornis sumatraensis (Sumatran serow): 138085285
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Entry
138085285 CDS
T10522
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03082
ATP-dependent chromatin remodeling
csum04714
Thermogenesis
csum05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138085285 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
138085285 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
138085285 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csum03021
]
138085285 (SMARCA4)
03036 Chromosome and associated proteins [BR:
csum03036
]
138085285 (SMARCA4)
Transcription machinery [BR:
csum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138085285 (SMARCA4)
Chromosome and associated proteins [BR:
csum03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
138085285 (SMARCA4)
Chromatin remodeling factors
BAF complex
138085285 (SMARCA4)
PBAF complex
138085285 (SMARCA4)
GBAF(ncBAF) complex
138085285 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Htt_C-HEAT
Motif
Other DBs
NCBI-GeneID:
138085285
NCBI-ProteinID:
XP_068835666
LinkDB
All DBs
Position
9:15391739..15481430
Genome browser
AA seq
1639 aa
AA seq
DB search
MSTPDPALGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSIMGPSPGPPSAGHPIPTQG
PGGYPQENMHQMHKPMESMHEKGMSDDPRYTQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQPQMPALPPPSVSATGPGPSPGPAPPN
YSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPT
GRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQ
EREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDT
ALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKE
YHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDK
RLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDE
TSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEE
EEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGL
QSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQ
TIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQL
RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLL
LTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRL
HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKG
KGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRI
LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSE
YFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVN
SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGS
ASFAHTAPPPAGVNPDSEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEA
RNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQW
LKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGPSTPTTSTRSRDKDDESKKQKKRGRPPA
EKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFK
KIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKED
DSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSD
DDSEEEQEEDRSGSGSEED
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaccagacccagccctgggtggaactcctcggccaggcccttctcccggcccg
ggcccctcccctggagccatgttgggccccagcccgggcccctcccctggctccgcccac
agcatcatgggacccagcccagggcctccctcggcaggacaccccatcccgacccagggc
cctggagggtaccctcaggagaacatgcaccagatgcacaagccaatggagtccatgcat
gagaagggcatgtcggatgacccccgctacacccagatgaaggggatggggatgcggtca
gggggccatgcaggcatggggcccccgccaagccccatggaccaacactcccaaggttac
ccctcacccctgggcggctctgagcacgcctccagcccggttccagccagtggcccgtcc
tcgggcccacagatgtcgtctgggcccgggggggccccgctagatggtgctgatccacag
gctttggggcagcagaaccgaggcccaacacccttcaaccagaaccagctgcaccagctc
agagcacagatcatggcctacaagatgctggcccgggggcagccccttcccgaccacctg
cagatggctgtgcagggcaagcggccgatgcccgggatgcagccacagatgccagctcta
cctccgccctccgtgtctgcaacagggcccgggcccagccctggaccagcacctccaaat
tacagcaggcctcatggtatgggagggcccaatatgccccctccaggaccctcaggcgtg
cctcctgggatgcccggccagccccccggagggcctcccaagccctggcctgaaggaccc
atggcgaatgctgctgcccccacgagcacacctcagaagctgatacccccacagccgaca
ggccgcccgtcgcctgcaccccctgctgtcccgcccgctgcctcccctgtgatgccgccc
cagacgcagtcaccggggcagccagcccagcctgcccccatggtgccgctccaccagaag
cagagccgcatcaccccgatccagaagccgcggggcctggaccccgtggagatcctgcag
gagcgggaatacaggctgcaggctcgcatcgcacaccgaattcaggaacttgaaaacctt
cccgggtccctggccggggatttgcgaaccaaagctaccatcgagctcaaggccctcaga
ctgctgaacttccagaggcagctgcggcaggaggtggtggtgtgcatgaggagggacaca
gccctggagacggccctcaacgccaaggcctataagcgcagcaagcggcagtccctgcgc
gaggcccgcatcaccgagaagctggagaagcagcagaagatcgagcaggagcgcaagcgc
cggcagaagcaccaggaatacctcaacagcattcttcagcatgccaaggatttcaaggaa
tatcacaggtcggtcacaggcaaaatccagaagctcacaaaggcggtggccacgtaccac
gccaacaccgagcgggaacagaagaaggagaatgaaagaatcgagaaggagagaatgcgg
aggctcatggccgaggacgaggagggctaccgaaaactcattgaccagaagaaggacaag
cgcctggcctacctcctgcagcagacagatgaatacgtagctaacctcacggagctggtg
cggcagcacaaggctgcccaggtggccaaggagaagaaaaagaagaagaaaaagaagaag
gcagaaaatgctgaaggacagacgcctgcgatcggacctgatggcgagcctctagacgag
accagccaaatgagcgacctgccggtgaaagtgatccacgtggagagtgggaagatcctg
acaggcacagatgcacccaaggctgggcagctggaggcctggctggagatgaacccgggg
tatgaagtagctccaagatctgatagtgaagagagtggctcagaagaagaggaggaggag
gaggaggaggagcagccgcagcccgcacagccccccaccctgcctgtggaggagaagaag
aagattccggatcccgacagcgacgatgtctccgaggtggatgcccggcacatcattgag
aatgccaagcaagatgtggacgacgagtacggcgtgtctcaggccctcgctcgtggcctg
cagtcctattatgctgtggcccacgccgttaccgagagggtggacaagcagtcggcgctt
atggtcaatggcgtgctcaagcagtaccagatcaaaggcttggagtggctggtgtccctg
tacaacaacaacctgaacggcatcctggctgacgagatgggcctgggcaagaccatccag
accatcgcgctcattacgtacctcatggagcacaagcgtatcaacgggcccttcctcatc
atagtgcccctctcaaccctctccaactgggcctacgagtttgacaagtgggccccctcc
gtggtgaaggtgtcctacaagggctccccagcagccagacgtgctttcgtcccccagctc
cgcagcggcaagttcaacgtcttgctgacgacatatgagtacatcattaaggacaagcac
atccttgcaaagatccgctggaagtacatgatcgtggacgaaggccaccgcatgaagaac
caccactgcaagctgacgcaggtcctcaacacgcactacgtggcgccccgccgcctgctg
ctgacaggcacaccgctgcagaacaagctgcctgagctctgggcactgctcaacttcctg
ctgcccaccatcttcaagagttgcagcaccttcgagcagtggttcaacgcgcccttcgcc
atgacgggggagaaggtggacctgaacgaggaggaaaccatcctcatcatccgtcgtctc
cacaaagtgctgcggcccttcctgctccggcggctcaagaaggaggtggaggctcagttg
cctgaaaaggtggagtacgtcatcaagtgtgacatgtcggccctgcagcgcgtgctctat
cgacacatgcaggccaagggggtgctgctgaccgacggctccgagaaggacaagaagggc
aaaggcggcaccaagaccctgatgaacaccatcatgcagctgaggaagatctgcaaccac
ccgtacatgttccagcacatcgaggagtccttttccgagcacttggggtttactggcggc
atcgtccaagggctggacctgtaccgagcctcagggaaattcgagctgctcgatagaatt
cttcccaaactccgggccaccaaccacaaagtgctgctgttctgtcagatgacctccctc
atgaccatcatggaagactattttgcataccgcggcttcaaatacctcaggctcgatgga
accacgaaagcggaggaccgggggatgctgctgaaaaccttcaacgagcccggctccgag
tacttcatcttcctgctcagcacccgggccgggggcctgggtctgaacctccagtcggct
gacactgtgatcatatttgacagtgactggaacccccaccaggacctgcaggcgcaggac
cgtgcccaccgcatcgggcagcagaacgaggtgcgtgtgctccgcctgtgcacggtcaac
agcgtggaggagaagatcctggccgcggccaagtacaagctcaacgtggaccagaaggtg
atccaggccggcatgtttgaccagaagtcctccagccacgagcggcgcgccttcctgcag
gccatcctggagcacgaggagcaggacgagagcagacactgcagcacgggcagcggcagt
gccagcttcgcccacactgcccctccgccagcgggcgtcaaccccgactcggaggagcca
cctctaaaggaagaagacgaggtgcctgacgacgagacggtgaaccagatgatagcccgg
cacgaggaggagttcgacctgttcatgcgcatggacctggaccgccggcgtgaggaggcc
cgcaaccccaagcggaagccgcggctcatggaggaggacgagctcccctcgtggatcatc
aaggacgacgccgaggtggagcggctgacctgtgaggaggaggaagagaagatgttcggc
cgtggctcccgtcaccgcaaggaggtggactacagtgactcactgactgagaagcagtgg
ctcaaggccatcgaggagggcacgctggaggagatcgaagaggaggtccggcagaagaaa
tcgtcacggaagcgcaagcgagacagcgacgccggcccctccaccccaaccaccagcact
cgcagccgcgataaggacgacgagagcaagaagcagaagaagcgcggccggccacctgct
gagaagctctcccctaacccgcccaacctcaccaagaaaatgaagaagatcgtggatgcc
gtgatcaagtacaaggacagcagcagtggacgccagctcagcgaagtgttcatccagctg
ccgtcccgcaaggagctgcccgagtactatgagctcatccgcaagcctgtggacttcaag
aagataaaggagcgcatccgcaaccacaagtaccgcagcctcaacgacctggagaaggac
gtgatgctgctgtgtcagaacgcgcagaccttcaacctggagggttccctgatctatgaa
gactccatcgtcctgcagtcggtcttcaccagtgtgcggcagaaaattgagaaggaggac
gacagtgaaggggaggagagcgaggaggaggaggagggcgaggaggaaggctccgagtca
gagtctcgctcagtcaaagtgaagatcaagctcggccggaaggagaaggcccaggatcgg
ctcaaggggggccggcggcggccgagccgcgggtccagggccaagccagtggtgagcgac
gatgacagcgaggaggagcaggaagaggaccgctcaggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
