Capricornis sumatraensis (Sumatran serow): 138085380
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Entry
138085380 CDS
T10522
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-13-like
KO
K16494
protocadherin beta
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csum04515
]
138085380
Cell adhesion molecules [BR:
csum04515
]
Cadherins
Protocadherins
138085380
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
138085380
NCBI-ProteinID:
XP_068835819
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Position
9:51860951..51863303
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AA seq
783 aa
AA seq
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MEASRKLVCKQRQVFFFFLFLHLALAGFEFRRYSVEEEAEGSSFVTNLAKDLGLGQGELF
RRGARIISKGNKLYLQLDQESGDLLLNKKLDREELCGQTEPCALRFQVLLENPLEFFQAE
LQVIDINDHTPVFMDGDMLLKVSENSLPGTTFPLKNAQDMDVGQNNIENYIISPNSYFRV
LTRKRSDGRKYPELVLDKVLDREEEAELRLTLTAQDGGSPPRSGTAHVYIEVVDINDNAP
EFEQPFYRVKIPEDSPKGFLVVKVSATDVDIGVNGEISYSLSQASEDISKTFEINAMTGE
IRLKKQLDFETTQSYEVSIEASDPGSLSGKCTVLVQVVDVNDNAPEVTMSAFTGQIAENS
PETVVAVFSVSDLDSEENGKVSCSIQYDLPFLLKSSMENFYTLVTERPLDRETRAEYSIT
ITVTDLGAPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVRENNSPALHIGSVSATDTDA
GANAQVNYSLLPSSDSPVPLASLVSINPDNGHLFALTSLDYEALRAFEFRVGATDRGSPA
LSSQALVRVLVADANDNAPFVLYPLQNASAPCTELVPRAAEPGYLVTKVVAVDGDAGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAPKQRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPPPEAEAAAAAPADPLTVSLVVALASVSSLFLFSVLVFVAVRLCRRGGA
GSAGRCPVPEGHFPGHLVDVSGTGTLSQSYQYEVCLTGGTGTGEFKFLKPVVTNFQAISP
GQK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagcaggaagctcgtttgcaaacaaaggcaagtctttttcttctttctcttc
ttacacttagctctggccggctttgaatttaggcgttattctgtggaggaggaagctgag
gggagctctttcgtaaccaatttagcaaaagacctgggtctggggcagggggaactcttc
aggcggggagcaaggatcatttccaaagggaacaaactgtatttgcagctggatcaggag
tctggggatttactgctaaataagaaactggaccgcgaggaactgtgtggtcagacagag
ccatgtgcgctgcgtttccaggttttactagagaatcccttagagttttttcaagctgag
ctacaggtaatagacataaatgaccatactcctgtgttcatggacggagatatgttgtta
aaagtatcagagaacagtcttcctggcactacatttcctctaaagaatgctcaggacatg
gatgtaggccaaaataatattgaaaattatataatcagtcccaactcctattttcgggtc
ctcactcgcaaacgcagcgatggcagaaaatatccggaacttgtgctggacaaagtactg
gatcgcgaggaggaagctgagctcaggttaaccctcactgctcaggatggtggttctcca
ccacggtctggcaccgctcacgtatacatagaagtcgtggacatcaacgacaacgcccct
gaatttgagcagcctttctacagagtaaagatccctgaggatagccccaaaggatttctt
gttgtcaaagtctctgctaccgatgtagacataggagtcaatggagagatttcctattca
ctttcccaggcttcagaagacatcagcaaaacctttgagatcaatgccatgactggagaa
attcgactgaaaaaacaacttgatttcgaaacaactcagtcctacgaggtcagtatcgag
gccagcgatcctggaagcctttctggaaaatgcaccgttctggttcaagtggtggatgtg
aacgacaatgccccagaagtcaccatgtctgcatttactggacagatcgctgagaactcg
cctgagactgtggttgcagttttcagtgtttcagatcttgactctgaagagaatgggaaa
gtaagttgctccattcagtacgatctaccgtttttgctgaaatcttccatggaaaatttt
tacaccctagtaacagagcgaccgctagacagagagaccagagccgaatacagcatcacc
atcactgtcacggacttgggggcacccagactgaaaaccgagcacaacataaccgtgctg
gtgtccgacgtcaacgacaacgcccccgccttcacccagacctcctacaccctgtgggtc
cgcgagaacaacagccccgccctgcatatcggcagcgtcagcgccacagacacagacgcc
ggcgccaacgcccaggtcaactactcgctgctgccgtcctccgactcgcccgtgcccctc
gcctccctcgtgtccatcaaccccgacaacggccacctcttcgccctcacgtccctggac
tacgaggccctgcgggctttcgagttccgcgtgggcgccactgaccgcggctcgccggca
ctcagcagccaggcgctggtgcgcgtgctcgtggcggacgccaacgacaacgcgcccttc
gtgctctacccgctgcagaacgcctcggcgccctgcaccgagctggtgcccagggcggcc
gagccgggctacctggtgaccaaggtggtggcggtggacggcgacgcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggctcac
aatggcgaggtgcgcacggcgcggctgctgagcgagcgcgacgcgcccaagcagcggctg
gtggtgctggtcaaggacaacggcgagccgccgctgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgcccccggaagcggaagcggcggcc
gcggcgccggccgacccgctcaccgtctccctggtggtggccttggcgtcggtgtcgtcg
ctcttcctcttctcggtgctggtgttcgtggcggtgcggctgtgcaggaggggcggggcg
ggctcggcgggtcgctgcccggtgcccgagggccacttcccgggccacctggtggacgtc
agcggcacggggaccctgtcgcagagctaccagtacgaggtgtgtctgactggaggtact
gggaccggtgagttcaaattcctgaagccagttgtaaccaactttcaggccatttccccg
ggccagaaatga
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