Capricornis sumatraensis (Sumatran serow): 138085608
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Entry
138085608 CDS
T10522
Symbol
SLC1A6
Name
(RefSeq) excitatory amino acid transporter 4 isoform X1
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04082
Neuroactive ligand signaling
csum04721
Synaptic vesicle cycle
csum04724
Glutamatergic synapse
csum05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
138085608 (SLC1A6)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
138085608 (SLC1A6)
04721 Synaptic vesicle cycle
138085608 (SLC1A6)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
138085608 (SLC1A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csum02000
]
138085608 (SLC1A6)
Transporters [BR:
csum02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
138085608 (SLC1A6)
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Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
138085608
NCBI-ProteinID:
XP_068836179
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Position
9:10032681..10049639
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AA seq
564 aa
AA seq
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MSSHGNSLFLRESGPRLGRVGWLQRLQESLQQRALRTRLRLQTMTREHVLRFLRRNAFIL
LTVSAVVIGVSLAFALRPYQLSYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLD
NKATGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSKEGLHREGRIETIPTADAFMD
LVRNMFPPNLVEACFKQFKTQYSTRLVTRTVVRTDNGSELGTSMPPSSSLENGTGLLENV
TRALGTLQEVLSFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLN
EAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFVHAGGILPL
IYFLITHRNPFPFIGGILQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGA
TVNMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVL
TSVGLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLSQRELELQEAELTLPSLG
KPYKSLMAQEKGASRGRGGNESAM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccatggcaacagcctctttctgcgggagagcggcccgcggctgggccgggtg
ggctggctgcagcggctgcaggagagcctgcagcagagagcgctgcgcacgcgcctgcgc
ctgcagaccatgacacgcgagcacgtgctgcggttcctgcgcaggaacgccttcatcctg
ctgactgtcagtgccgtggtcattggggtcagcctggcctttgcgctgcgcccataccag
ctcagctaccgccagatcaagtacttctctttccctggagagctcctcatgaggatgctg
cagatgctggtgctgcccctcatcgtctccagcctggtcacaggtatggcgtccctggat
aacaaggcgacaggacggatggggatgcgggcagctgtgtactacatggtgaccacggtc
atcgcggtcttcatcggcatcctcatggtcaccatcatccaccctgggaaaggctccaag
gaggggctgcaccgagagggtcggatcgagaccatccccacggcagatgccttcatggac
ctggtcagaaatatgtttccgcccaaccttgtggaggcctgcttcaaacagtttaagaca
cagtacagcacgaggttggtaaccaggactgttgtgaggacagataatggatctgagctg
ggcacctctatgccgccttcatcctcactggagaatggaaccggcctcctggaaaatgtc
acgcgagccttgggcaccctgcaggaggtgctgagctttgaagagactgtacctgtgcct
ggctcagccaatggcatcaatgccctgggccttgtggtcttctcagtggccttcgggctg
gtcattggtggcatgaagcacaagggccgagtcctgcgggacttcttcgacagcctcaat
gaggctattatgaggctggtgggcatcattatctggtatgcacccgtgggtatcctgttc
ctgattgctggcaagatcttagagatggaggacatggccgtcctggggggtcagctgggc
atgtacaccctgaccgtcattgtgggtttgttcgtccatgccggtggcatcctgcctctc
atctacttcctcatcacccaccggaatcctttccccttcattggaggaatactgcaggct
ctcatcaccgccatgggcacgtcttccagctctgcgacattgcccatcaccttccgctgt
ctggaggagggcctcggtgtggaccgccgcatcaccaggttcgtactgcccgtgggggcc
actgtcaacatggacggcaccgccctctatgaggccctggccgccatcttcattgcccaa
gtcaacaactacgagctcaacctgggccagatcacaactatcagtatcacagctacagca
gccagtgtcggggctgccggcatcccccaggcaggtctggtcaccatggtgattgtgctc
acctcggtcggcctgcccactgaagacatcacgctcatcatcgctgtggactggttcctt
gaccgacttcgcacaatgaccaatgtgctgggggattctatcggagcggccgtcattgaa
catctgtctcagcgggagctggagctgcaggaagctgaactcaccctccccagcctgggg
aagccctacaagtcactcatggcacaggagaaaggggcgtccaggggacggggaggaaat
gagagtgccatgtga
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