Capricornis sumatraensis (Sumatran serow): 138085618
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Entry
138085618 CDS
T10522
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03440
Homologous recombination
csum03450
Non-homologous end-joining
csum04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138085618 (RAD50)
03450 Non-homologous end-joining
138085618 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
138085618 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csum03032
]
138085618 (RAD50)
03400 DNA repair and recombination proteins [BR:
csum03400
]
138085618 (RAD50)
DNA replication proteins [BR:
csum03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
138085618 (RAD50)
DNA repair and recombination proteins [BR:
csum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
138085618 (RAD50)
BRCA1-C complex
138085618 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
138085618 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
DUF1664
AAA_29
Intein_splicing
DUF2703
Motif
Other DBs
NCBI-GeneID:
138085618
NCBI-ProteinID:
XP_068836189
LinkDB
All DBs
Position
9:complement(21779662..21892787)
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSIQGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMLCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSREI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALESRKKQMEKDNSELEQKMEKVFQGS
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHMQARDSLIQSLATQLELDGFALGPFSERQIKNFHKLVRERQEKESETASQLLNDFTR
KEALKQKQIDEIRDKKTGLGRIIELKSEILTKKQNELKNVKYELQQLEGSSDRILELDQE
LTKAERELSKAEKNSNVETLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTAARTQMEM
LNKDKADKDEQIRKIKYRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINIELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRGFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIELKEKEIPELRNKLQSVNRDIQRLKNDIEEQETLLGAIIP
EEESAKVCLTDVTIMERLQMELKDVERKIAQQAAKLQGLDLDRSVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTANELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQLSPLETTLEKFQQEKEELINKKNTSHKIAQDKINEIKEKVKNIHSYMKD
IENYIQDGKDDYKKQKETELNKVIAQISECEKHKEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHSLAIGRQKG
YEEEIIHFKKELREPQFRDAEEKYREMMIIMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGVLALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIEQCSEIVTCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattcagggcgtgcggagttttggaatagaggataaa
gataaacaaattatcactttcttcagtccccttacaattttggttggacccaatggggcg
gggaaaacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgaccccaaggttgctcaagaaacagatgttagagcc
cagattcgtctacagtttcgtgatgtcaatggagaacttgtggctgtgcagagatctatg
ctttgtactcagaaaagcaaaaagacagaatttaaaaccttggaaggagtcattactaga
acaaagcatggtgaaaaggtcagtctcagctccaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaaatctgtgctaaataatgtcattttctgtcaccaagaa
gactcgaattggcctttaagtgaaggaaaggctttgaagcaaaagtttgatgagattttt
tcagcaacaaggtacataaaagccttggaaacacttcggcaggtacggcagacgcaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatctgaagcaaaacaaagaaaaagct
tgtgagattcgtgatcagattactagtaaggaagcccagttaacatcctcgagggaaatt
gtcaaatcctatgagaatgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagacttgacaatgaaattaaagctttggaaagccgaaagaag
caaatggaaaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggtct
gatgagcaactaaatgatttatatcacaatcaccagagaacagtaagggagaaagaaagg
agattggtagactgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactacttgtggaacagggccgtctacaactacaagcagatcgtcat
caggaacatatgcaagctagagattcattaattcagtctttggcaacacagctagaattg
gatggctttgcactcggaccattcagtgaaagacagataaaaaattttcacaagcttgtg
agagagaggcaggaaaaggaatcagaaactgccagccaactgttgaatgacttcacacga
aaagaagctctgaaacaaaaacaaatagatgagataagggataagaaaactggactggga
agaataattgagctaaagtcagaaatcctaactaagaagcagaatgagctgaaaaatgtg
aagtacgaattacagcagttggaaggctcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgagcgtgaactaagcaaggctgagaaaaacagcaatgtagaaactcta
aaaacagaagtaataagccttcaaaatgagaaagcagacctagacaggaccctgcgtaag
ttggaccaggagatggagcagctaaaccatcacacagcagcacgcacccagatggagatg
ctcaacaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatacaggcatagt
gatgaattaacttcgttgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaaccagactagggacagacttgccaagttgaacaaggaa
ctagcttcagctgagcaaaataaaaatcatataaatattgagctaaaaaggaaggaagag
caattgtccagctatgaagacaaactgtttgatgtctgtggcagccaggattttgaaagt
gacttggacagacttaaagaagaaattgaaaaatcgtcaaaacaacgagccatgttggct
ggagctacggcagtttattcccagttcattactcagttgacggatgaaaaccagtcatgt
tgccctgtctgtcaaagaggttttcagacagaagctgaattacaagaagtcatcagtgat
ttgcagtccaagctgaggcttgctccagataagctcaagtcgacagaatcagagttaaag
aaaaaagaaaagcggcgtgatgaaatgctgggactagtgcccatgaggcaaagcataatt
gaattgaaggagaaggaaataccagaattaagaaacaaactgcagagtgtgaacagagac
atacagcgcctcaagaatgacatagaagaacaggaaacactcttgggtgcaattatacct
gaagaagaaagtgctaaagtgtgtctgacagatgttacaattatggagaggctccagatg
gaactaaaagatgttgaaagaaaaattgcacagcaagcagctaaactccaaggactagat
ttggatcgaagcgttcagcaagtaaaccaggaaaaacaagaaaaacaacacaagttagat
acagtttctagtaagatagaattgaaccgtaagcttatacaggaccagcaggaacagatt
caacacctaaaaagcacagcaaatgaacttaaatcagaaaaacttcagatatccactaat
ttacaacgtcggcagcagctggaggaacagactgtggaattatctactgaagttcagtcc
ttatacagagaaataaaggatgctaaagagcagctaagccctttggaaacaacactggaa
aaatttcagcaggagaaagaagaattaatcaacaaaaaaaatacaagccacaaaatagca
caagataaaataaatgaaatcaaagagaaggtaaaaaatattcacagttacatgaaagac
attgagaattatattcaagatggaaaagatgactataagaagcaaaaagaaactgaactt
aataaagtcatagctcaaataagtgaatgtgagaaacacaaagaaaagattaataaggaa
atgggaatcatgagacaagatattgatacacagaagatacaagaaaggtggctacaggat
aaccttactttaagaaaaagaaatgaagaactaaaagaagttgaagaagaaagaaaacaa
catttgaaggaaatgggtcaaatgcaggttttacaaatgaaaaatgaacatcagaagttg
gaagaaaaaatagacaatataaaaagaaatcacagtttggcaataggacgacagaaaggt
tatgaggaagaaattattcattttaagaaagaacttcgagaacctcaatttcgggatgct
gaggaaaagtacagggaaatgatgattattatgagaacaacagagcttgtgaacaaggat
ctggacatctattataagacccttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gagtacatagaaattcgatcagatgccgatgaaaatgtatcagcttctgataaaaggagg
aattacaactaccgagtggtgatgctaaagggagacacagccttggatatgagagggcgt
tgcagcgccggacaaaaggtattagcctcactcatcattcgcctagccctggctgaaaca
ttctgcttaaactgtggcgtccttgctttggacgagccaacgacaaatcttgaccgagaa
aacattgaatctcttgctcatgctctggttgagataataaaaagtcgctcacaacagcgg
aacttccagcttctggtaatcactcatgatgaggattttgtggagctcctagggcgttct
gagtatgtggagaaattctacaggattaagaagaacattgagcagtgctcagagattgtg
acatgcagtgtcagttccctaggatcttatgttcattaa
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integrated database retrieval system
