Capricornis sumatraensis (Sumatran serow): 138085727
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Entry
138085727 CDS
T10522
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
KO
K13133
gem associated protein 5
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138085727 (GEMIN5)
03041 Spliceosome [BR:
csum03041
]
138085727 (GEMIN5)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138085727 (GEMIN5)
mRNA cycle factors
P-body specific factors
138085727 (GEMIN5)
Spliceosome [BR:
csum03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
138085727 (GEMIN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_1st
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_1st
MIOS_WD40
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_LRRK2
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
138085727
NCBI-ProteinID:
XP_068836343
LinkDB
All DBs
Position
9:complement(65724435..65762926)
Genome browser
AA seq
1507 aa
AA seq
DB search
MGQEPRTLPPSPNWYCSRCSDAVPGGLFGFAARTSVFLVRVGPGADTIPGTPPFRVIGEL
VGHTEKVSGFTFCHHPGQYNLCATSSDDGTVKIWEVEAKTVVTEHALHQHTISALHWSPR
VKDLIVSGDEKGVVFCYWLNRNDSQHLFIEPRTIFCLTCSPHHEDLVAIGYKDGIVVIID
ISKKGEVMHRLRGHDDEIHSIAWCPLSGEDCLSINQEENSEEPEIPNGKVTAQTPVTKGC
YLATGSKDQTIRIWSCSRGRGVMTLKLPFLKRRGGGVDPTVKERLWLTLHWPKDQPTQLV
SSCFGGELLLWDLTQSWRRKYTLFSGSSEGQNHSRIVFNLCPLQTEEDKQLLLSISMDRD
VKCWDMATLECCWTLPSLGGFAYSLAFSPVDTGCLAIGVGDGMIRVWNTLSIKNNYDVKN
FWQGVKSKVTALCWHLTKEGCLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYSLAWGP
PVPAMALGEGDRLSLTLYSCGGEGIVLQHNPWKLSGEAFDINKLIRDTNSIKYKLPVHTE
ISWKADGKIMALGNEDGSIEIFKAPNLKLICTIQQHHKLVNTISWHHEHGSQPELSYLMA
SGSNNAVIYVHNLQTVIESNPESPVTITEPYRTLSGHTAKITSLAWSPHHDGRLVSASYD
GTAQVWDTLQEEPLCNFRGHRGRLLCIAWSPLDPDCIYSGADDFCVYKWLTSMQEHSRPP
QGKKSIELEKKRLSQPKPKPKKKKKPTLRVPVKQGLCDGNEEESVKESLGPVENGVSDQE
TEEEAREPEPPCGVTSAVSKEPIICTPAALGFEKSKSTINNKVTLLKKDVPKEKPEALIK
KRKARSMLPLSTSLDHRSKEELHQDCLVLATTKHSKGPNEDVSTDLEERFHLGLFTDRAT
LYRMIEVEGKSHLENGHPELYHQLMLWKGDLKGVLQTAAERGELTDNLVAMAPVAGYHVW
VWAVEAFAKQLCFQDQYVKAASHLLSIHKVYEAVELLKSNHFYREAIAIAKARLRPEDPI
IKDLYLSWGAILEKDGHYALAAKCYLGATSAYDAAKVLAKKGDAASLRTAAELASIVGEN
ELSASLALRCAQELLLARNWVGAQEALQLHTSLKGQRLVFCLLELLSKHLEEKQLSEGKS
SFSYNAWPADSEGSFVERVTAVWKSTFSLDSPEQYQAAFQQLQKIKYPSATSNTPSKQLL
LHICHDLTLAVLSQEAGSWDAAVEGLLRAVIRSYDSGNFTIMQEVHSAFLPQGCDHLRDK
LGDHQSPTTPAFKSLKAFFIYGRLYEFWWSLSGPCHESSVWVRAAHRSKTSTEQSQEVDS
VSPEETDPKVSQPEPSRTPELDVRLIEESEQMQNACKELLSEKHADLQNAQRTVAEVQET
LGEMIRQHQKSQLCKSTANGPDKNEPEQEGESLSHPQNQCKEEKNEPVSLPELTKRLTEA
NERIAKLPESIKTWPFPDVLECCLILLHVGSQCPSFVTQEMQQQAQELLQKYGNTKVYKR
HYQTLYA
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgggacaggaaccgcgcacgttgccgccctcccctaactggtactgctcccgatgcagc
gatgccgtgcccgggggcctcttcggcttcgcggcgcggacttcggtcttccttgtccgc
gtgggcccgggcgcggacacgatcccagggacgcccccatttcgagtcataggcgaattg
gtgggacacacggaaaaggtgtctggcttcacgttttgtcatcacccgggtcaatacaac
ctctgtgccaccagctccgatgatgggactgtgaaaatctgggaagtagaggcaaaaaca
gttgtgacggaacatgcactccatcagcatacaatatcagcattgcattggtctcctcga
gtaaaggatctgatagtatctggagatgaaaaaggagtagttttctgttactggcttaac
agaaatgacagccagcacctctttatagaacctagaacaattttctgtcttacttgctcg
cctcatcatgaagatttagtagctattggctacaaagatggcatagtggttataattgac
atcagcaagaaaggagaagttatgcacaggcttcgaggccacgatgatgagatccattcc
atagcctggtgtcccctgtcgggtgaagactgtttatccataaaccaagaggaaaattca
gaagaacctgaaattcccaatgggaaagttacagcacaaactccagtaacaaaaggctgc
tacttagccactgggagcaaagaccagaccattcggatctggagctgctctagaggccga
ggggtgatgactttgaaattgccctttcttaaaagaagaggagggggtgtagacccaact
gttaaagagcgcctttggttgacactccattggcccaaggatcagccaactcagctggta
tccagctgttttggaggtgaactgctgctatgggatctcactcagtcttggagacggaaa
tataccctctttagtggttcatcagaagggcaaaatcattcaaggattgtgtttaattta
tgtcctctgcaaactgaagaagacaaacagctgctgctttccatatcaatggacagagat
gtaaaatgttgggacatggccactctggagtgctgctggaccctgccttccctcggtggg
tttgcctacagtctggctttctctcctgtggacacaggctgcttagcgataggcgttggg
gatggcatgatccgcgtatggaatacactctccataaagaacaactatgatgtgaaaaat
ttttggcaaggtgtcaagtccaaggttacagcgctgtgctggcacctgaccaaggaaggc
tgcttagcttttggaactgacgatggaaaagtgggattgtacgacacctactccaacaaa
cctccacagatttccagcacatatcacaagaagactgtgtactcgttagcctggggacca
ccagtacctgccatggcactcggagaaggagacagactttccctcactttatacagttgt
ggaggagaagggattgtcttacaacacaacccttggaagcttagtggagaggcctttgac
atcaacaaactcatcagggacaccaattcaatcaaatacaaattgcctgtacacacagag
atcagctggaaagcagatggcaaaatcatggctcttggcaatgaagatgggtcaatagaa
atattcaaggctcctaacctgaaactgatctgcaccatccagcaacatcataagcttgtg
aataccattagctggcatcatgagcatggcagccagccagaactgagctatctgatggcc
tctggctccaacaatgcagtcatttatgtgcacaacctgcagactgtcatagagagcaat
cctgaatctccagtgaccattacagagccctaccggaccctgtcagggcacacagccaag
atcaccagtctggcatggagcccacaccatgatggaaggctggtgtccgcttcctacgac
ggtacagctcaggtgtgggatactctccaggaagagcctctatgcaatttccgaggacat
cgaggtcgactgctttgcattgcatggtccccactggatccagattgcatctactcaggg
gcagatgatttctgtgtgtacaaatggctcacttccatgcaggaacactcccgacctccg
caaggcaagaaaagtattgaattagagaaaaagcggctctctcaacctaagccaaagccc
aaaaagaagaaaaagcccaccttgagagtgcctgtaaagcaaggattatgtgacgggaat
gaagaagagagtgtcaaggagagcctgggccctgttgagaatggcgtgtcagaccaggag
acagaggaggaagcccgcgagccagagccaccctgtggtgtcacctcggcagtttctaaa
gaaccaattatctgcactccagcagccttaggttttgaaaagtcaaaaagcaccattaat
aacaaagtcactttactgaaaaaggacgtacctaaagagaagccagaagccttaatcaag
aagcgaaaagctcgttccatgcttcccctgagtacaagtctggaccacagatccaaagag
gagcttcatcaggactgtttggtattagccaccaccaaacactccaaagggccaaatgag
gatgtgtctactgatcttgaggaaagatttcacctggggcttttcacagacagggctacc
ctgtacagaatgattgaggttgaaggaaaaagtcacttggaaaatggccaccctgagtta
tatcaccagctcatgctttggaaaggagatctaaaaggtgttctgcagacggcagcagaa
agaggggagctgacagacaatctcgtggctatggcaccagtcgccggttaccatgtgtgg
gtatgggccgtggaagcttttgccaaacaactgtgttttcaggaccagtatgtcaaggct
gcctctcacctgctttctatccacaaagtgtatgaagctgtggagctgctcaagtcaaac
catttctacagggaagctattgcaattgccaaggcccggctgcgcccagaggacccaatc
ataaaggacctgtacctcagctggggagccatcctagaaaaagacggccactatgcctta
gcagcaaaatgctatttaggggccacttccgcttatgatgcagccaaagttttggccaaa
aagggggatgcggcatcacttaggacagcagcagagctggcctccatcgtgggagagaac
gagttgtcggcttccctggctctaagatgtgcccaggaactgcttctggcccggaactgg
gtgggagcccaggaggctctccagctccatacaagtctaaagggtcagagattggtgttt
tgccttcttgagctactgtccaagcacctggaggaaaagcagctctctgaaggcaaaagt
tctttttcttacaatgcttggcccgcagacagcgaagggtcctttgtggagagggtgact
gcagtgtggaaaagcaccttcagcctcgactccccagagcagtaccaggcagcatttcag
cagctgcaaaagatcaagtacccatctgctacaagtaacactccctccaaacagctcctg
ctccacatttgccatgacctgaccttggcagtgctaagccaggaagcgggctcctgggac
gcagctgtggaaggactgcttcgggctgtgatccggagctacgactcaggaaacttcacc
atcatgcaggaagtgcactcagcctttcttccgcagggctgtgaccacctaagagacaaa
ctgggtgatcatcagtctcccactacaccagctttcaaaagtctgaaggccttttttatt
tacggacgtctatatgaattctggtggtctctctctgggccttgccatgagtccagtgtc
tgggtaagagctgctcacagaagtaaaacctctactgaacagagccaagaggttgacagt
gtcagccctgaagaaactgaccccaaagtttcccagccagagccaagcaggactccagaa
ctagacgtgagacttatagaagaaagtgagcaaatgcagaacgcttgtaaggagctcttg
tcagaaaagcatgctgacctccaaaatgcacagagaactgttgctgaagtccaagagacc
ttgggcgaaatgatccgccaacaccagaagagtcaactctgtaaatccacagcaaatggc
cctgataagaatgaacctgaacaggaaggagagtccctctctcatcctcagaaccagtgt
aaagaagaaaaaaatgaaccagtttctttgcctgaattaaccaaaagacttacagaggca
aatgagagaatagctaagcttcctgagagtattaagacctggcctttcccagacgtgctg
gaatgctgcctcatcctgcttcacgttgggtcccaatgtcctagctttgtgacccaggaa
atgcagcaacaggctcaagagctccttcagaagtatggcaacacaaaagtttacaaacga
cattaccagaccctctacgcatga
DBGET
integrated database retrieval system
