Capricornis sumatraensis (Sumatran serow): 138085777
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Entry
138085777 CDS
T10522
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csum03021
]
138085777 (TAF1B)
Transcription machinery [BR:
csum03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
138085777 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
CoV_NSP2_N
DUF4661
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
138085777
NCBI-ProteinID:
XP_068836423
LinkDB
All DBs
Position
1:19062804..19117607
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AA seq
590 aa
AA seq
DB search
MDLEETREFRERCSQCAAVSWGLTDEGKYYCTSCHNVTERSREVIDTGAIPNTKIQAINR
GLKRKRKLEKGWDWYVCEGFQHILYQQAEALQSLGVGPELKNEVLHNFWKRYLQKSKQAY
CKNPVHTSRRKTTVLEDNSSHSDWESEPELLSDVSCLSFAESGAESQPDVRTPKPFPVIK
ASHSETTSVCSGSLDGVEYSLRKEKGIMKMSVPRTLAFCYLSLLWQRETITLSDLLRFVE
EEHIPYIHAFQHFPEEMKLYGRDKGIFAIESWPNYEVIFKKIIEVATFLDLPRFPDITEN
CYLHPNILCMKYLMEVNLPDEMHNLTCLVVKATGIGEADFLRFDPIAKKAKTVKYDVQAV
AVIVVALKLLFLLDDNLEWSLSNIAKKYNEKNKEDKPWFDFRKWYQVMKKAIDEKKQKWE
EARAKFLWKGEKPIYYSAIDRPVVYKRREMLVSLQKQFSTLVDSAPNIEKKKPSSFQFNW
TEEDSERPCFHGHSLQGVLQQKGQSLTTKNSLYWLSTQKFCKSHCKHVTTYEESNFSLSY
QFILNLFSFLLRIKTSFLHEEVSLIEKRLFKAKYNKTNKKSSRSRKTRKC
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaggagacgagagagttcagagagcgctgttctcagtgtgccgctgtttct
tggggtcttactgatgaaggcaaatattattgcacttcttgccacaatgttacagaaaga
tctagggaagttatagacactggggctattcctaatactaaaatacaagccatcaaccgg
ggacttaaaagaaaacgaaaacttgagaaaggctgggattggtatgtgtgtgaaggtttt
cagcacatactttatcaacaagcagaagccttgcagagccttggagtaggcccagagtta
aagaatgaagttttgcataatttttggaagcgctaccttcagaagagcaagcaggcatat
tgtaaaaacccagttcataccagcagaaggaaaactacggtattagaagataattcaagc
cattcagactgggagagtgagcctgagctgctgagtgacgtgagctgtctgtcttttgct
gaaagtggagcagagtctcagcctgatgtccgcaccccaaagcctttccccgtcatcaaa
gcatcacactcagaaacgacctctgtctgttctgggtctcttgatggagtggaatattcg
ctgcggaaggaaaaggggatcatgaagatgagtgtaccacggacgctagccttctgctat
ctgtcattactttggcagagagagacaattactctttcagatcttttaagatttgttgaa
gaggaacatattccttacatacatgcttttcagcattttccggaagagatgaaattatat
ggacgtgacaaaggaatctttgccatagagtcttggcctaactatgaagttatctttaaa
aaaataattgaagttgccacattcttagatttgccgcgttttccagacataactgaaaac
tgctatcttcatccaaacatcttgtgtatgaaatacttgatggaggtcaatctccctgat
gaaatgcataatttaacctgcctagtggtaaaagcgactggaataggagaagcggatttt
ctaagatttgatcctatagctaaaaaggcaaaaactgttaaatatgatgtgcaagctgta
gctgtcattgtagtggcattgaaactgctctttttattggatgacaatttagaatggtct
ttgtctaatattgccaagaaatataatgaaaagaacaaagaagataaaccatggtttgat
ttcagaaaatggtaccaagttatgaagaaagctattgatgagaagaaacaaaagtgggag
gaagccagggcaaagtttctgtggaaaggtgaaaagccaatctactactcagccattgac
aggccagtggtgtataaaagaagagaaatgctggtgagtctacagaaacagtttagcacg
ctggtggattcagcaccaaacattgaaaaaaaaaagccttcaagttttcaattcaactgg
actgaagaggacagcgagaggccttgtttccatgggcatagcctccagggagtcctgcag
cagaaaggccagtccctgacaaccaagaattccctctactggctgagtactcagaagttc
tgtaaaagccattgtaagcatgtgacaacctacgaagaatccaatttttctctgagttac
cagtttatactaaatctcttctccttcttgctgagaataaagacttcctttctccatgaa
gaagtgagcttaatagaaaagagactttttaaagcaaaatataataaaacaaacaagaaa
tcttcgagatccaggaaaacaagaaagtgctga
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