Capricornis sumatraensis (Sumatran serow): 138086050
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Entry
138086050 CDS
T10522
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03018
RNA degradation
csum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138086050 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
138086050 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138086050 (LSM4)
03041 Spliceosome [BR:
csum03041
]
138086050 (LSM4)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138086050 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
138086050 (LSM4)
Spliceosome [BR:
csum03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
138086050 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
138086050
NCBI-ProteinID:
XP_068836912
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All DBs
Position
9:6728189..6740292
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AA seq
139 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccttgtcgctgctgaaaacggctcagaatcacccaatgctggtggagctcaaa
aacggggagacatacaacgggcacctggtgagctgtgacaactggatgaacatcaacctg
cgtgaggtgatctgcacgtccagggacggggacaaattctggcggatgcccgagtgctac
atccgcggcagcaccatcaagtacctgcgcatccccgacgagatcatcgacatggtcaag
gaggaggtggtggccaagggccgtggccgcggtggcctgcagcagcagaagcagcagaag
ggccgcgggatggggggcgccgggcgaggtgtgttcggtggccgaggccgaggtgggatc
cctgggactggcagaggtcaaccagaaaagaagccaggcagacaggcgggcaagcagtga
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