Capricornis sumatraensis (Sumatran serow): 138086065
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Entry
138086065 CDS
T10522
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csum03041
]
138086065 (DDX39A)
Enzymes [BR:
csum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138086065 (DDX39A)
Spliceosome [BR:
csum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138086065 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
138086065
NCBI-ProteinID:
XP_068836939
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All DBs
Position
9:11762998..11771542
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AA seq
427 aa
AA seq
DB search
MAEQDVENELLDYEEDEEPQAPPESAPPPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKRNCPHVVVGTPGRILALVR
NRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacaggatgtggaaaacgagcttctggattatgaggaagatgaagagccccag
gcacctccagagagcgctccacctccccccaagaaagacgttaagggttcctatgtttcc
atccacagctctggcttccgggactttctgttgaagccggagctcctgagggccatagtg
gactgtggctttgagcatccatcagaggtccagcacgagtgtattccgcaagccatcctg
ggcatggacatcttgtgccaggccaaatcagggatgggcaagacagctgtttttgtgttg
gccaccctgcagcagattgagcccgtcaacggacaggtgacggtcctggtgatgtgccac
actcgagagctggccttccagatcagcaaggagtacgagcgcttctccaaatacatgccc
agcgtcaaggtgtctgtgttctttgggggcctgtccatcaagaaggatgaggaggtgttg
aagaggaactgtccccacgtggtggtggggacgccgggccggatcctggcacttgtgcgc
aataggagcctcaacctgaagaatgtgaagcacttcgtgttggatgagtgcgacaagatg
ctggagcagctggatatgcggcgggacgtgcaggaaatcttccgtctgaccccccacgag
aagcagtgcatgatgttcagcgccaccttgagcaaggagatccgacccgtgtgcaggaag
ttcatgcaagatcccatggaggtgtttgtggacgacgagaccaagctcacgttgcacggg
ctacagcagtactacgtgaaactcaaggacagtgagaagaaccgcaagctcttcgacctc
ctggatgtgttggagtttaaccaggttgtgatctttgtgaagtcagtgcagcgctgcatg
gctttggcccagctcctggtggaacagaacttcccagctattgccatccacaggggcatg
gctcaggaggagcgcctgtcgcgctatcagcagttcaaggacttccagcggcggatcctg
gtggccaccaatctgttcggccgagggatggacattgagcgcgtcaacatcgtcttcaat
tatgacatgcctgaggactcggacacctacctccaccgtgtggcccgtgcgggtcgcttc
ggtaccaaaggcctggccgttactttcgtgtctgacgagaacgatgccaaaatcctcaat
gatgtccaggaccggtttgaagtgaacgtggcagagcttccagaagaaattgacatctcc
acatacattgagcagagccggtaa
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