Capricornis sumatraensis (Sumatran serow): 138086358
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Entry
138086358 CDS
T10522
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csum03021
]
138086358 (CHD1)
03036 Chromosome and associated proteins [BR:
csum03036
]
138086358 (CHD1)
Transcription machinery [BR:
csum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
138086358 (CHD1)
Chromosome and associated proteins [BR:
csum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
138086358 (CHD1)
SLIK complex
138086358 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
138086358
NCBI-ProteinID:
XP_068837230
LinkDB
All DBs
Position
9:complement(97293326..97363764)
Genome browser
AA seq
1798 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDNSQENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQRQASSNSGSE
EDSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDYE
PKNKVKSRKPQNRSKSKNGKKIIGQKKRQIDSSEEEEEDEEEYDNDKRSSRRQATVNVSY
KEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGD
PNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRW
LKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECS
WEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELR
DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL
TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAF
LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQ
KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH
LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL
RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNK
EELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEAGPLTVGDELLSQFKVA
NFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISF
NGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFG
GPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTF
RISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYIIPCHTKAAHFDIDWGKEDDSNLL
IGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEA
QRLSGAGGSKRRKARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKDEITSVKHPNK
KIKTERDSEEKTEPDVCIKKEPEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKRE
NKVKEAIQKEKDIKEEKLSESKSESKERPKKSSVLDAPVHITASGEPVPIAEESEELDQK
TFSICKERMRPVKAALKQLDRPERGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIK
QWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSSLNTQVIRNPDVERLKE
NTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKNDSRKRPYSSFSNGKDHRDWDHYK
QDSRYYNDREKHRKLDDHRSRDHRSNLEGSLKDRTHSDHRSHSDHRLHSDHRSSSEYAHH
KSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSIEHKSTPEHTWSSRKT
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttccggctctggatctggttcgagttctggaagcagtagt
gacggaagcagtagccagtcaggtagcagcgactcagactctggatccgaatcgggcagt
cagtcggagtctgagtcagacaattcccaagaaaataaagttcaagcaaaaccaccgaaa
gttgatggagctgagttctggaaatctagccctagtattttggccgttcagagatctgca
atgcttaagaagcagcagcagcagcagcaacgtcaagcttcatctaatagtggatcagag
gaggattcctctagcagtgaagattctgatgactcatccagtgaggtcaaaaggaaaaag
cataaagatgaagattggcagatgtctggatcggggtcaccctctcagtctggttcggat
tcggaatctgaagaagaaagagataaaagcagttgtgatgaaacagaatcagattatgag
ccaaaaaataaagttaaaagtagaaaacctcaaaatcgatctaagtcaaaaaatggaaaa
aagattattggacaaaaaaagagacagattgattcatctgaggaggaggaggaggatgaa
gaagaatatgataatgataaaagaagctctcgtcgccaagcaactgtcaatgttagctat
aaggaagatgaagaaatgaaaacagattctgatgacctcctggaagtctgtggagaggat
gtacctcaacctgaggaagaggaatttgaaacaatagaacggtttatggattgtcggatt
ggaagaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgac
ccgaatgcaggatttgaaaaaaacaaggaaccaggagagatccagtatttaattaaatgg
aaaggatggtcacatatccacaatacttgggagacagaggaaacccttaagcagcaaaat
gttagaggaatgaaaaaattagataattataagaaaaaagatcaggaaacaaaaagatgg
ttgaaaaatgcttctccagaagatgtggaatattataattgccagcaagaacttacagat
gatctccataagcagtatcaaatagtggaacgaataattgctcattccaatcagaagtca
gctgctggctatcctgattattattgcaaatggcagggtcttccatactcagagtgcagc
tgggaagatggcgctctaatttccaaaaagtttcaagcatgcatagatgagtatttcagc
aggaatcaatcaaaaaccactccttttaaagactgcaaagtattaaaacaaaggccaaga
tttgtagccctaaagaagcagccatcctatattggaggacatgaaggattagaattaaga
gattatcaactgaatggtttaaattggcttgctcactcttggtgcaaaggtaatagttgc
atacttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctgaactat
ttgtttcatgaacaccaattatatggaccttttctgttagtagtaccactgtccactctc
acttcctggcaaagggagattcagacatgggcttctcaaatgaatgctgtggtttattta
ggtgacatcaacagcagaaacatgataagaactcatgaatggatgcatccccagaccaaa
cggttaaaatttaatatactgttaacaacttatgaaatcttgctgaaggataaggcattc
cttggaggtctgaattgggcatttataggtgtggacgaagcacatcgattaaagaatgat
gactctcttctgtataaaactttaatagattttaagtccaatcaccgtctccttatcact
ggaactcctctgcaaaactccctcaaagagctctggtctttgctacatttcattatgcca
gaaaagttttcttcctgggaagattttgaagaagaacatggcaaaggcagagaatatggt
tatgcaagcctccacaaggagcttgagccatttctgttgcggagggttaagaaagatgtg
gaaaaatctcttcctgccaaggttgaacagattttaagaatggaaatgagtgctttacag
aaacaatattacaagtggatattaactaggaattacaaagccctcagcaaaggttccaag
ggcagtacctcaggctttttgaatattatgatggagctaaagaaatgttgtaaccattgc
tacctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacac
ttaatccgtagtagcggaaaactgattcttcttgacaaactgttaattcgcctaagagag
cgaggcaatagagttcttattttttctcaaatggtgcggatgttagatatacttgcagaa
tatttgaagtatcgtcagttcccctttcaaagattagatggatcaatcaaaggggagctg
aggaaacaagctctagatcattttaatgctgaaggatcagaggatttctgctttttgctt
tccacaagagctggaggtttaggaattaacttagcttcagctgacactgttgttatattt
gattctgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattggg
caaaagaaacaggtgaatatttatcgtctggttacaaagggatcagttgaagaggatatt
cttgaaagggccaaaaagaagatggttttagatcatcttgtgattcaaagaatggacaca
actgggaagacagtactacacacaggttctgccccttcaagttctactcctttcaataaa
gaagagttatcagccattttaaagtttggtgctgaggaactttttaaggagcctgaagga
gaagaacaagagccccaggaaatggatatagatgaaatcttgaagagggctgaaactcat
gaaaatgaagcaggacctttaactgtaggagatgaattactttctcagttcaaggttgcc
aacttttcaaatatggatgaggatgatattgagttggagcctgaaagaaattcaaagaac
tgggaagaaatcattcctgaagatcaaagacgacgattagaagaagaggaaagacaaaag
gaacttgaagaaatttatatgctccccagaatgagaaactgtgcaaaacagattagtttc
aatggaagtgaagggaggcgcagtagaagtaggagatactctggatctgatagtgattca
atatcagaaagaaaaaggccaaagaaacgtggaagaccacgaactatccctcgggaaaat
attaaaggatttagtgatgcagaaattcggcggtttatcaagagttacaagaaatttggt
ggccctctggaaagattagatgcaattgctcgagatgctgaattagttgataagtcagag
acagacctcagacgactaggagaattggtacataatggttgcattaaagctttaaaggac
aactcttcaggaacagaacgaacaggtggtagacttggaaaagtaaagggcccaacattc
cgaatatcaggtgtacaggtgaatgccaagctggtcatctcccatgaagaagaattaata
ccgctgcacaaatccattccttcagatccagaagaaagaaagcagtatatcatcccatgc
cacacgaaggcagctcattttgatatagactggggcaaagaagatgattccaatttgtta
attggtatctacgaatatggatatggaagctgggaaatgattaaaatggatcctgacctc
agtctgacacacaagattcttccagatgatcctgataaaaaaccacaagcaaaacaatta
cagacacgtgcggactacctcatcaaattacttagtagagatcttgcaaaaaaagaagct
cagaggctttctggtgcaggaggttcaaaaaggcgaaaagcaagagctaagaagaataaa
gcaatgaagtctataaaagtgaaagaggaaataaagagtgattcttctcccttgccctca
gagaagtctgatgaagatgatgataaggatgaaatcacttctgtgaaacatccaaacaaa
aaaattaaaacagaaagagacagtgaagaaaaaactgagccagatgtttgtataaagaag
gaaccagaagaaaagagggaagcaaaagaaaaggaaaataaaagagaacttaaaagggag
ataaaagaaaaagaggataagaaagatataaaggaaaaagattttaaagagaaaagagaa
aacaaagtaaaagaagctatacagaaagaaaaagacataaaagaagaaaagctgagtgaa
tccaagtctgaaagcaaggaaagacctaagaaatcttcagtgttggatgctccagttcac
atcaccgcaagtggtgaaccagtgcccatagcggaagaatctgaagagctggatcagaag
acattcagcatttgtaaagagaggatgaggcctgtcaaagcagcattgaagcagcttgat
aggcctgagagaggcctttcggaaagagaacaactggaacatactagacagtgcttgata
aaaatcggagaccatatcacagaatgtctgaaagagtatacaaatcctgaacaaatcaag
cagtggagaaaaaacctgtggatttttgtatctaagtttactgagtttgatgcaagaaaa
ttacataaattatataagcatgctattaaaaaacggcaggaatcccagcaaaataatgac
cagaacagcagcttgaatacgcaagtgattagaaatccagatgtggaaagattaaaagag
aatacaaatcatgatgacagtagcagggacagttattcatctgacagacacttatctcaa
tatcatgatcatcataaagaccgacatcagggagattcatacaagaagaatgactctagg
aagagaccttattcttcttttagtaatggtaaagatcatcgtgattgggatcactacaag
caagacagcagatattataatgatagagagaaacacagaaaactggatgatcacaggagt
agagaccacagatcaaatctggaaggaagtttaaaagacagaactcattctgatcatcgt
tctcattcagatcatcggttacattcagaccatcgatcaagttctgaatatgcacaccat
aaatcttccagggattataggtatcactcagattggcagatggaccatagagcttccagt
agtggtcccagatctccactagaccagaggtctccttatggctccagatctccatttgaa
cactcaattgaacacaaaagtacacctgagcatacctggagtagtcggaaaacataa
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integrated database retrieval system
