Capricornis sumatraensis (Sumatran serow): 138087100
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Entry
138087100 CDS
T10522
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csum04040
]
138087100 (SCN11A)
Ion channels [BR:
csum04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138087100 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
138087100
NCBI-ProteinID:
XP_068838044
LinkDB
All DBs
Position
10:complement(57847177..57924899)
Genome browser
AA seq
1777 aa
AA seq
DB search
MDDRCYPVIFPDGRNFRPFTPDSLAAIKKRIAIQKEKKKSKDWKAAEPEPRPQLDLKVSR
KLPKLYGDIPRDLVAKPLEDLDPFYSNHKTFMVLNKKRTIYRFSAKRALFILGPFNSIRS
LAIRISVHSLFSMFIICTVIINCVFMALAHQKGSISVNVDNAEYVFLGIYLFEALVKILA
RGFILDEFSFLRDPWNWLDSIVIATAFVSYSPYINASSFSLSSLRTFRVFRALKAISVIS
GLKVIVGALLHSVKKLVDVMILTLFCLSIFALVGQQLFMGNLSYKCVSNSCNDDYQDYCF
KKEESTEFKMCGVWMGNRACPEQYKCKDSKKNPDYNYTNFDNFGWSFLAMFRLMTQDSWE
KLYRQTVRTSGLISVLFFVVVIFLGSFYLVNLTLAVVTMTYEEQNKNVAAETEAKEKMFQ
EAQQLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGSKKRKSFFLRKSGQDQIPGS
DSDEDSSKKPHLLEQTKRLSQNLSVDHCDEHGDSFQRQRALSAVSILTITMQEQEKSQEP
CLPCGENLASKYLVWDCSPWWLDIKKVLRTVMTDPFTELAITVCIIINTVFLAMEHYKMD
QNFENILYTGNLVFTGIFMAEMCLKIIALDPYHYFRRGWNIFDSVVALLSLADVILNHTV
SGKSSISFRSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQ
LFGSRFNNKKNHLKSCDPEVLCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQETNPR
LCIIVFLSIMVIGKLVVLNLFIALLLNSFSNEERNGHLEGKVKKTKVQVALDRFRRAFCF
VIHTLEHFFRKRCRRQHLSKQKEVTEGPGGESKDIIPLVTGMKKGPEIWEEFGVLTSVPM
TLHDRTWLAPLAEEEDDAESLGEDKGQAATQPEAGKQASEVHQKSKDLTSPGIQSVEIDV
FSEDDPMSIQNLRKKSDATSVLSECSTIGPQDPFMRLLEMVPKKEPERCLPKGLNCCSLC
CTVDKRKSSWITWWSLRKTCYQIVKHSWFESFIIFVILLSSGALVFEDINLDKQPKIQEL
LKCTDTIFTYIFILEMGLKWVAFGFGKYFTSVWCWLDFVIVIVSVTSLIDLMGLKSFRIL
RALRPLRALSQFEGMKVVVYALIGAIPAILNVLLVCLIFWLIFCILGVSLFSGRFGRCVN
ATDVKSVIDYNIVANRSQCESGNFYWHTPHVNFDNVLMAYLALLQVATFKGWMDIMYAAV
DSTEEGQQPKFEARSCMYLYFVVFIIFGSFFTLNLFTGVIIDNFNQQQKKISGQDVFLTE
EQKKYYNAMKKLGSKKPQRPIPRPQNKCQGFVFDLVTHQVFDIIIIILILLNMLSMMAES
HDQSDTMKHLLECLNLAFVVIFAIECLIKIFALRQYYFTNGWNLFDCVIVVLSIVSTVVS
ALETQAEIPFPPTLFRMVRLVRIGRILRLVRAARRIRTLLFALMMSLPSLFNIGLLLFLV
MFIYAIFGMNSFCKVKEDSGIDDIFNFQTFISSMLCLFQITTTAGWDALLSPMLKSNNSC
DPKTESCHLSTIAIIYFVTYIIISSLIVVNMYIAVILENFNVATEESEDPLGEDDFEMFY
EVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNKYQFLVMDLPMVSGDRLHCLDILF
AFTTRVLGESSGLDSMKAAIEEKFMEANPFKKLYEPIITTTKRKEEERCAAVIQKAFRKY
MMKTKCTLKDRPHSTLQTLSNGDLPSSGVAEGKVHYD
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaggtgctacccagtgatctttccagatgggaggaatttccgccccttcact
cctgactctttggctgcaatcaagaagcggattgccatccaaaaggagaaaaagaagtcc
aaagattggaaagcagcagaacctgagcctcgacctcaactcgacctaaaggtctccaga
aagttgcccaagctttatggtgacattccccgtgacctggtagcaaagcccttagaagac
ttggacccattctacagcaatcacaagacatttatggtgttgaacaaaaagagaacaatc
taccgcttcagcgccaaacgtgccttgttcattttggggcctttcaattcaatcagaagt
ttggccattagaatctcagtccattcattgttcagcatgttcatcatctgtactgtcatc
atcaactgcgtgttcatggccttagctcatcagaagggcagcattagcgtgaatgttgac
aatgctgagtatgtcttccttgggatttatttatttgaagcattagttaaaatattggca
agaggttttattctggatgagttttctttcctgcgagatccatggaactggctggactcc
attgtcattgcaacagcatttgtgtcatattctccatatatcaatgccagcagcttcagt
ctgtcatccctacgtaccttccgagtattcagagctttgaaagcaatttcagtaatttca
ggtttgaaggtcattgttggggccttgctgcactctgtgaagaagcttgtcgatgtgatg
atcctgactctcttttgcctcagcatctttgccctggtaggtcagcagctcttcatggga
aatctgagctacaaatgtgtcagtaattcctgtaacgatgactatcaagactattgcttt
aaaaaagaagagtccactgaattcaaaatgtgtggtgtgtggatgggcaacagggcttgt
cctgaacaatataaatgcaaagatagcaaaaaaaatcctgactataattacacaaatttt
gacaactttggctggtcttttcttgccatgttccggcttatgacccaagattcctgggag
aagctttatcgacagaccgtgcgtacctcagggctcatctcggtcctcttctttgtggtg
gtcatcttcctgggctctttctacttggttaacttaaccctggctgttgtcaccatgact
tatgaggagcagaacaagaatgtagctgccgaaacagaagccaaggagaagatgtttcag
gaagcccagcagctgttgaaggaggagaaggaggctctggttgccatgggaattgacaga
agttcacttaattcccttgaagcatcatctttttccccaaagaagagaaagctatttggt
agtaagaaaagaaaatccttctttttaagaaagtctgggcaagaccagattccaggatca
gattctgatgaagattcttcaaaaaagccacacctccttgagcaaaccaaacgactgtcc
cagaatctgtcagtggaccactgtgatgagcacggagactccttccaaaggcagagagcc
ctgagtgctgtcagcatccttaccattaccatgcaggaacaagagaaatcacaggagcct
tgcctcccatgtggggaaaatctggcatccaaatacctcgtgtgggactgtagcccctgg
tggctagacattaagaaggtcctgagaactgtgatgactgatccctttactgagctggcc
atcaccgtctgcatcataatcaacactgtcttcttggccatggagcattacaaaatggac
cagaattttgagaatatattgtacacggggaacttggttttcactggcattttcatggct
gaaatgtgcctaaaaatcattgcgctggatccctaccactactttcgtcgaggatggaac
atttttgacagtgttgttgctcttctgagtttggcagatgtgatattaaaccatacagtt
tcaggaaaaagttcgatatcatttcgttccttaagagtgctgagggtcttcaagttagcc
aaatcctggccaactttaaacacactgattaagatcattggccattctgttggagccctt
ggaaacctgactgtggtcttggccattgtggtctttattttctcagtagttggcatgcag
cttttcggctctagattcaataacaaaaagaatcatttaaagtcctgtgaccctgaagtc
ctgtgtttacgacgctggcacatgggggatttctaccactcctttttggtggtattccgc
atcctttgtggcgaatggattgaaaacatgtgggaatgtatgcaagaaactaacccaagg
ctgtgcattattgtgtttctgtcgatcatggtgattggaaaacttgtggtgctcaacctc
ttcattgccttgctactcaattccttcagcaatgaggagagaaatggacacttggaagga
aaagtcaagaaaaccaaagtccaggtagccctggatcggttccgccgggctttctgtttt
gtaatacatactcttgagcattttttcaggaagcgatgcaggaggcaacatttatcaaag
caaaaagaggtgacagagggccctggtggagagagcaaagatatcattcccctggtcaca
gggatgaaaaagggcccagagatctgggaggagtttggtgtactaacttctgtaccaatg
accttgcatgatcggacttggttggccccacttgcagaggaagaagatgatgctgaatcc
cttggtgaagataagggacaggctgccacacaacctgaggctggaaaacaggccagtgaa
gttcatcagaagagcaaggatctcactagtccaggaattcagagtgtggaaattgatgta
ttctctgaagatgatcctatgtcaatacagaatcttcggaagaagtctgatgctacgagt
gtgctctcagaatgtagcaccattggtccacaggatccctttatgcggctacttgaaatg
gttcccaaaaaggaaccagagaggtgtttgcccaaaggcctgaattgctgctctctatgc
tgtactgtggacaagagaaagtcctcctggatcacttggtggagcctgcgaaaaacctgc
taccaaatagtgaaacacagctggtttgagagctttattatctttgtgattctgctgagc
agtggggcactggtatttgaagatattaaccttgataaacaacccaaaatccaagaatta
cttaaatgtactgacactattttcacatacatttttatcttggagatgggtctgaaatgg
gtggcctttggatttgggaagtatttcacaagtgtctggtgctggctcgatttcgtcatt
gtgattgtctctgtgaccagtctcattgacttaatgggcttgaagtccttccggattctt
cgagcactgaggcccctgcgagcattgtcccagtttgaaggaatgaaggtggtagtttat
gctctcataggtgccatacctgctattctgaatgttttgcttgtctgcctcattttctgg
ctcatattttgtatcctgggagtaagtctgttttctggaagatttggaagatgtgttaat
gcaacagatgtaaaatcagttatagattataacattgttgcaaaccggagtcaatgtgaa
agtggaaatttctattggcacaccccgcatgtcaactttgacaatgtgttaatggcttac
cttgcgctactgcaagtggcaacatttaagggctggatggatattatgtatgcagctgtt
gattccacagaggaaggacaacagccaaagtttgaggcacgttcttgcatgtacctttac
ttcgtagtttttatcatctttggctcattcttcactctgaatctctttactggtgttatt
attgacaacttcaaccaacagcagaaaaagataagtggccaagacgtctttctgacagaa
gaacagaagaaatactataatgcaatgaaaaaattaggatccaaaaaacctcaaaggccc
attccaaggcctcagaacaaatgccaaggctttgtgtttgaccttgtcacacaccaggtc
tttgatatcattatcatcatcctcattctcctcaacatgctgagcatgatggctgaatca
catgaccaatcggacaccatgaaacatttacttgagtgtctcaacctggcctttgtggtc
atctttgcaattgagtgtctcatcaaaatctttgctttgaggcaatactacttcaccaat
ggctggaatttatttgattgtgtgatcgtggtcctttctattgttagtaccgtggtttct
gccttggaaacccaggccgagattcctttccctccaacactgttcagaatggttcgcttg
gttcggattggccgaatcctgagacttgttcgagcagcacgaagaatcagaactctgctt
ttcgctctgatgatgtccctgccctctctatttaatattggtcttctcctctttctggtt
atgtttatttatgccatttttggtatgaactctttttgcaaagtgaaggaagattctgga
attgatgacatcttcaacttccaaacttttataagcagcatgctctgcctcttccagata
accacgacggcaggctgggatgccctcctcagccccatgttaaaatcaaataattcctgt
gaccccaagacagagagctgtcacctctctaccatagccataatctacttcgtcacttac
atcatcatctcctctctcattgtggtcaacatgtatattgctgtgattttagaaaacttc
aatgtagccactgaagaaagtgaggaccctttgggtgaagatgactttgaaatgttctac
gaagtctgggaaaagtttgacccagaagcaacacagtttatcaaatattctgccctttct
gactttgctgatgcccttcctgagcctctgcgtgtggcaaagccaaataaataccaattt
ttagtcatggacttgccaatggtgagtggagatcgtctccattgcttggatattctcttc
gctttcaccacgagggtacttggtgagtccagtggcctggatagcatgaaagcagcgata
gaggagaagttcatggaggccaaccctttcaagaagttatatgaacccataatcaccacc
accaaaaggaaggaagaggaaagatgtgctgctgttattcaaaaggcctttcgaaagtac
atgatgaagaccaagtgtaccttgaaagacaggcctcattcaaccctccagacactctcc
aatggagacttacccagctctggggtggccgagggcaaggtccattatgactga
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integrated database retrieval system
