Capricornis sumatraensis (Sumatran serow): 138087348
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Entry
138087348 CDS
T10522
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
138087348 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csum03036
]
138087348 (ERCC6)
03400 DNA repair and recombination proteins [BR:
csum03400
]
138087348 (ERCC6)
Chromosome and associated proteins [BR:
csum03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
138087348 (ERCC6)
DNA repair and recombination proteins [BR:
csum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
138087348 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
138087348
NCBI-ProteinID:
XP_068838458
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All DBs
Position
10:2062492..2131009
Genome browser
AA seq
1481 aa
AA seq
DB search
MPNERIPHSSQTQEPDCSQSQDVSGSEEGTVKQEKGGDVDLGQSLPACSSADGPSSSTEG
CLLELPRRGPAVLHIDRHQIQAVEPSAQALELQGLGVDVYDQDVLEQGVLQQVDSAIHEA
NRVAQLAEAEKEYRSVLDDLTSCTTSLRQIDRIIEQLGPQAATNKDINRKLDSVKRQKYN
KEQQLKKITAKRKRLQAVLGAAEVRVDRGPGSLEEEDAEAEPSCLGSMLMPAQETAWEEL
VRTGQMTPFGTKIPQKQEKKPRKLMLNEASGFEKYLADQAKLSFERKKQACNKRAAKKAS
ASATSELSSTLSENKPDERGKVVSKTDKRLKKHIKKLQKRALQLQGQVGLLKGKKPWDCD
VRPQAQGTSEGEESEYLPTEEELEEAVGADLPGEGADWEQRLGLNRRKRQKKVTVQEIDD
DFFPSSGEEAEGTGGGRKVVRCRDDGDEDYYKQRLRRWNKLRLKDKEKSSRLEDDSEESD
AEFDEGFKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLS
YSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSFTHKKERL
VRDIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHR
IILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKC
ACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILN
GEMQIFSGLVALRKICNHPDLFSGGPKSLKGAPDEELGEDEFGYWKRSGKMIVVESLLKI
WHKQGQRVLLFSQSRQMLDVLEVFLRAQKYSYLKMDGTTAIASRQPLIARYNEDTSVFVF
LLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEE
KIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDTSQSTETSAIFAGTGSDVQ
TPRRHLKRRLQQACGTDPNVPVGRQFPDGKTSANAAVSSEERPAAPGSEVRAGTSDQGVP
LKDALQTPHSLTSSERLGEEADAVSRPRESLVIHENGDSSDSPRISRTCGTSGEESISEK
ESLSDKRESWQVQREPLWENEQTENNCYKHKSKMKHHVAEEAREKHLRSNQKPESSKHRR
DAKFEGTRIPHLVKKRQYRRRDSENESEAKERSHDDYVLEKLFRKSVGVHSVMKHDAIVD
GASPDCVLVEAEANRVAQDALRALRLSRQRCLGAASGVPTWTGHRGLAGAPAGKKSRFGQ
KRNSSFSVQRPSSTSPKEKCQDSTVKKDGKDHVLEHFSGKVEDAESSSGALTSSSLLAKM
RARNHLILPERLESEIGRLPEAAAPLPCSTEHDDLLVEMRNFIAFQAQVDGQASTQEILQ
EFESRLSASQSCVFRELLRNLCTFHRTSAGEGIWKLKPEYC
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgaaagaatcccccactcaagtcaaactcaggagccagactgttcacagagc
caggatgtcagtggcagtgaagaggggacagtcaagcaggagaagggtggtgacgtggac
ctggggcagagcctccccgcttgttcctctgctgatggaccctccagttccaccgaaggc
tgtctcttggaacttcccaggagagggccagccgtgctgcacatcgacaggcatcagatc
caggcggtggagcccagtgcgcaggccctggagctgcagggcttgggtgtagatgtctat
gaccaggatgtgctggagcaaggggtacttcagcaggtggacagcgccatccatgaggcc
aaccgcgtggcccagcttgccgaggcagagaaggagtatcggtcagtcctggacgacctc
acgtcatgtacgacatccctaaggcagattgatagaattattgaacaacttggccctcaa
gctgccaccaacaaagatatcaacaggaagctagactctgtaaaacgacagaagtataac
aaggaacaacagctgaagaagatcacagcaaaacggaaacgcctccaggccgtccttgga
gcagcagaggtgagggtggaccgaggccccggcagtctggaggaggaggatgcagaagca
gagccgtcctgccttggcagcatgctcatgcctgctcaggagaccgcttgggaagagctc
gtccgcactggtcagatgacaccttttggtaccaaaatccctcagaagcaggagaaaaag
cccagaaaactaatgctcaacgaagcatcaggctttgaaaagtatttggcagatcaagcg
aaactgtcctttgaaagaaagaagcaagcttgtaataaaagagcagctaaaaaagcttcg
gcctcggccacttctgagctgagctcaacactcagtgaaaacaaaccagacgagagaggc
aaagttgtatcgaaaacagataaacgcctgaaaaaacacatcaagaaactccagaagagg
gctcttcagctccaggggcaggtcggattgctaaagggaaaaaaaccctgggattgtgat
gtgagaccacaagcgcaggggacctctgagggtgaagagtctgagtacttgcccacggag
gaggagctggaggaggcggtgggcgccgacctgcccggggagggcgccgactgggagcag
aggctggggctcaatcgccggaaacggcagaagaaagtcactgtacaggagatcgatgat
gacttttttccaagttctggggaagaagctgaaggcacgggaggaggtcggaaagtggtg
agatgccgagacgatggagacgaagattattataagcaacgattaaggagatggaataaa
ctgaggctgaaggacaaagagaagagttcgaggcttgaagatgattctgaggaaagcgat
gctgaatttgacgaaggttttaaaatgccgggttttctgttcaaaaagctttttaagtac
cagcagacaggtgttcggtggctgtgggaattacactgccagcaggcaggaggcattctg
ggagacgagatgggattgggcaagaccatccagataattgccttcttggcaggcctgagc
tacagcaagatcaggactcgcggttcaaattacaggttcgaggggttgggtccgaccata
attgtctgtccaacaacggtgatgcatcagtgggtgaaggaatttcacacgtggtggcct
ccattcagagtggcagttctgcatgaaaccgggtcctttacccacaaaaaggagagacta
gttcgagacattgctcattgtcacgggattttgatcacttcttactcctacattcgactg
atgcaggatgatattagcaggcacgactggcactacgtgatcctggacgagggacacaaa
attcggaatccaaatgctgccatcacccttgcttgcaaacagttccgcacgcctcatcgc
atcatcctgtctggctcaccgatgcagaataacctgcgcgagctgtggtctctctttgac
ttcatcttcccaggaaagctgggtacattgcctgtgttcatggagcagttctcagtcccc
atcaccatgggggggtattcaaacgcctccccagtacaggttaaaactgcttataagtgt
gcgtgtgtcttacgagataccataaatccatacctgctgcggagaatgaagtcggatgtc
aaaatgagcctttctttgccagataaaaacgaacaggtcttattttgccgtcttacagat
gaacaacataaagtctaccaaaatttcatagattccaaagaagtttacaggattctcaat
ggagagatgcagattttctctggactcgtagccctaagaaaaatctgcaaccaccctgat
ctcttttctggaggccccaagagtcttaaaggcgccccagacgaggagctaggggaagat
gagtttggatactggaaacgttccgggaaaatgatagttgtcgagtccttgctgaaaata
tggcacaagcagggccaacgagtgctgctgttttctcagtccagacagatgttggacgtc
cttgaagtgttcctcagagcccagaagtattcttacctcaagatggatggcaccacggcg
atagcttccagacagccactgatcgcaagatacaatgaggacacgtccgtgtttgtgttt
cttctgaccactcgcgtgggtggcctaggagtcaacctgacgggtgcaaaccgcgtcatc
atctatgaccccgactggaacccaagcacagacacgcaggcccgggagcgcgcgtggagg
atcggccagaaaaagcaagtgacggtgtacaggctcctcaccgcaggcaccattgaggaa
aagatttaccaccgacaaatcttcaagcagtttttgacaaacagagtgctaaaagatccg
aagcagagacgctttttcaagtccaatgacctttatgagctgtttactctgagcagccct
gacacatcccagagcacggaaacgagcgctatctttgcaggaactggttcagatgttcag
acacccagacgccatttaaaaagaagacttcagcaggcctgtggaacagacccgaatgtc
ccagtgggcagacagttccctgatggtaagacgtctgcaaatgccgccgtctcatctgaa
gagagacctgcagcaccaggcagcgaagtgcgtgcaggaacttctgaccaaggtgttcct
ttgaaagacgcccttcagacacctcatagtctgaccagcagtgagaggcttggagaagag
gcagatgcagtctccagaccacgggagtccttagtgattcatgaaaacggggacagttca
gattctccaagaatcagcagaacgtgcgggacgtctggtgaggaaagcatcagtgaaaag
gagagtctttctgataaaagagaaagctggcaggttcagagagagcctctttgggagaac
gagcaaacggaaaataattgttataaacacaagtcgaaaatgaaacatcatgtggcagaa
gaggccagggagaaacacctgaggtcgaatcaaaagccagagagctctaagcaccgcaga
gacgccaagtttgagggaactcgaattccacacctggtgaagaagaggcagtaccggagg
cgagacagtgaaaacgagagcgaggccaaggagcgcagccacgacgactacgtcctggag
aagcttttcagaaagtcagtgggcgtgcacagcgtcatgaagcacgacgccatcgtggat
ggagccagcccagactgtgtcctggtggaggcggaggccaaccgcgtggctcaggacgcc
ctcagagcgctgaggctctctcggcagcggtgtctgggcgcagcgagtggtgtgcccact
tggactggccacagagggcttgctggtgcaccagcaggaaaaaagagcagattcggtcag
aaaaggaactccagtttctccgtgcagcgtccctcttcaacatctccaaaggaaaaatgc
caggacagcactgtgaagaaggatgggaaagatcatgttttggagcattttagtggaaaa
gttgaagatgcagagtcttcatctggggctctcacttcgtcctcactgttggcgaaaatg
agagctaggaaccacctcattttgccagagcgcttagaaagtgaaattgggcgcctccca
gaagccgctgctccgctgccctgcagcacagagcatgatgacctgctggtggaaatgaga
aacttcatagcctttcaggcccaagttgatggccaggccagcacccaggagatactgcag
gagttcgagtccaggttatcagcatcacagtcttgtgtctttagagaactcttgagaaat
ctgtgcacttttcatagaacttctgctggtgaaggcatttggaaactcaagccagaatac
tgctga
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integrated database retrieval system
