Capricornis sumatraensis (Sumatran serow): 138087379
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Entry
138087379 CDS
T10522
Symbol
RHO
Name
(RefSeq) rhodopsin
KO
K04250
rhodopsin
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
138087379 (RHO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
csum04030
]
138087379 (RHO)
G protein-coupled receptors [BR:
csum04030
]
Rhodopsin family
Vision
Opsin
138087379 (RHO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srv
7TM_GPCR_Srw
7TM_GPCR_Srsx
7TM_GPCR_Srx
TAS2R
7tm_4
Motif
Other DBs
NCBI-GeneID:
138087379
NCBI-ProteinID:
XP_068838510
LinkDB
All DBs
Position
10:complement(101683205..101688155)
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AA seq
348 aa
AA seq
DB search
MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY
VTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLG
GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIP
EGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFSIPMIVIFFCYGQLVFTVKEAAAQQQES
ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSSV
YNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTVSKTETSQVAPA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggaccgagggcccgaacttctacgtgcctttctccaacaagacgggcgtggtg
cgcagccccttcgaggccccgcagtactacctggctgagccgtggcagttctccatgctg
gccgcctacatgttcctgctgatcgtgctcggcttccccatcaacttcctcacgctctac
gtcacggtccagcacaagaagctgcgcacacccctcaactacatcctgctcaacctggcc
gtggccgacctcttcatggtcttcgggggcttcaccaccaccctctacacctctctgcat
ggatacttcgtctttgggcccacgggctgcaacctggagggcttctttgccaccctgggc
ggtgaaatcgccctgtggtccttggtggtcctggccatcgagcggtacgtggtggtgtgc
aagcccatgagcaacttccgtttcggagagaaccacgccatcatgggcgtcgccttcacc
tgggtcatggctctggcctgcgccgcgccccccctggtcggctggtccaggtacatcccg
gagggcatgcagtgctcgtgcgggattgactactacacgctcaagccggaggtcaacaat
gagtcgttcgtcatctacatgttcgtggtccacttctccatccccatgatcgtcatattc
ttctgctacgggcagctggtgttcaccgtcaaggaggcggctgcccagcagcaggagtcg
gccaccactcagaaggccgagaaggaggtcacccgcatggtgatcatcatggtcatcgct
ttcctgatctgctggctgccctacgccggggtggcattctacatcttcacccatcagggc
tctgactttggccccatcttcatgaccatcccggctttctttgccaagacttcgtccgtc
tacaaccccgtcatctacatcatgatgaacaagcagttccggaactgcatgcttaccacc
ctctgctgtggcaagaacccgctgggtgacgacgaggcctccaccaccgtctccaagaca
gagaccagccaggtggcgcctgcctaa
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integrated database retrieval system
