Capricornis sumatraensis (Sumatran serow): 138087650
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Entry
138087650 CDS
T10522
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03082
ATP-dependent chromatin remodeling
csum04714
Thermogenesis
csum05225
Hepatocellular carcinoma
Brite
Transcription machinery [BR:
csum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138087650 (SMARCC1)
Chromosome and associated proteins [BR:
csum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138087650 (SMARCC1)
PBAF complex
138087650 (SMARCC1)
GBAF(ncBAF) complex
138087650 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138087650
NCBI-ProteinID:
XP_068839045
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Position
10:97476093..97597981
Genome browser
AA seq
1105 aa
AA seq
DB search
MAAAAGGGGLGTTTGAAGAGGAAAATGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHTDAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLARPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHVYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPAESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG
KEDEDPGKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQIPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
METDTDAQQPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKEAEENKE
LTDSCKERESDVGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGPNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMMPGQPMPGRMMPTVAASIHPPGSGPTPPGMPPIPGNILGPRVPLTAPNGMYPPPPQQ
QPPPPAPADGGPPPPAPGPPASAAP
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgggcggcggagggctggggacgacgaccggcgccgcgggcgcagga
ggcgcggcggcggccacgggcctggccgtttatcggcggaaggacgggggcccggcgagc
aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcacacggatgctcctacgaataaaactctggctgggctg
gtggtacagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaacccggcc
ttcaccaagctcccggcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
attcttggggctgcttacaaatacaaaaatgaacaaggatggcggaggtttgatctgcag
aatccatcccgaatggatcgtaatgttgaaatgtttatgaacattgaaaaaacattggtt
cagagcaattgtctggccagacccaacatctacctcattccagacattgatctgaagttg
gctaacaaattgaaagatataatcaaacgacatcagggaacatttactgatgagaagtca
aaagcttcccaccatgtttatccatatccttcctcacaagaggatgaagagtggttgaga
cctgtgatgagaaaagacaagcaggtgttggtgcactgggggttttaccctgacagctat
gatacttgggtccatagtaatgatgttgatgcggaaattgaagatccaccgattccagaa
aaaccatggaaggttcatgcgaaatggattttggacactgatgttttcaatgaatggatg
aatgaggaggattatgaggtggatgagaacaggaagcctgtgagttttcgtcagcgaatt
tcaacaaagaatgaagagccagtcagaagtccagagagaagagatagaaaagcatcagct
aatgctcgaaaaaggaaacactcaccttcccctccgcccccgacacccgcagaatcccgg
aagaagagtgggaagaaaggccaagctagtctttatgggaagcggagaagtcagaaagag
gaagatgagcaagaagatcttaccaaggacatggaagacccaacacctgtacccaacata
gaggaagtggttcttccaaaaaatgtaaacccaaagaaagatagtgaaaatacacctgtt
aaaggaggaactgtggcagatctagatgagcaggatgaagaaacagtcacgacaggagga
aaggaagatgaagatcctggcaaaggtgaccagagtagatccgttgaccctggtgaagat
aatgtgactgagcagaccaatcacattattattcctagctatgcatcgtggtttgattat
aactgtattcatgtgattgaacggcgtgctcttcctgagtttttcaatggaaaaaacaaa
tccaagaccccagagatatacttggcatatcgaaatttcatgattgacacataccgccta
aacccccaagaatatttaaccagcactgcttgtcggaggaacttaactggagatgtgtgt
gctgtgatgagggttcatgcctttttagaacagtgggggcttgttaattaccaagtggat
ccagaaagtcgacccatggcaatggggcctcctccaactcctcatttcaatgtgttagct
gataccccttcggggcttgttcctctacatcttcgatcacctcagattcctgctgctcag
cagatgttaaattttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggt
cttcgtactgacatctactccaagaaaaccttagcaaagagtaaaggtgctagtgccgga
agagaatggactgaacaggagactctgctactcttggaggctctggagatgtataaagat
gattggaacaaagtgtcagagcacgttggaagtcgcactcaggatgaatgcatccttcac
ttcttgaggcttcccattgaggacccataccttgagaattctgatgcttccctggggccc
ctggcctaccagcctgtccccttcagtcagtcgggaaacccagtcatgagcactgttgct
tttttggcatctgtggtggatcctcgtgtggcatctgctgcagccaaagcagctttggag
gagttttctcgggtccgggaggaggtgcccctggagttggtggaggctcatgtcaagaaa
gttcaagaagcagcccgagcctccgggaaggtggatcccacctacggcctggagagcagc
tgcattgcaggcacggggccagatgagccagagaagctggaaggagctgaagaggaaaaa
atggaaacagatactgatgctcagcagcctgaaaaggcagaaaacaagggggaaaatgaa
acggatgaaggtgataaagcacaagatggagaaaatgaaaaaaacagtgaaaaggaacag
gatagtgaagttagcgaggataccaaatcagaagaaaaggaggctgaagagaacaaggaa
ctcactgattcttgtaaagaaagagaaagtgatgttgggaagaagaaagtagaacatgaa
atttctgaaggaaacgtagccacagccgcagcagctgctcttgcctcagctgcaacgaaa
gccaagcacctggctgccgtggaagagagaaagatcaagtctctggtagctcttctggtt
gagacacaaatgaagaaactggagattaaacttagacattttgaagaactagaaactatc
atggacagagagaaagaagctttagaacaacagaggcagcagttgcttacggagcgccag
aacttccacatggagcagctgaaatacgctgagttgcgagcccgacagcaaatggaacag
cagcagcatgggccgaaccctcaacaggcacaccagcactcaggaggacccggcctggca
ccgctgggagcagcaggacatcccggcatgatgcctcatcagcagccccctccctaccct
ctgatgcaccaccagatgccgccgcctcatccaccccagccaggtcagataccaggccca
ggttccatgatgcctggacagcccatgccaggccgcatgatgcccaccgttgcagccagc
atccacccccctgggagtggccccacccctcctggtatgcctccaatcccaggaaacatc
ttaggaccccgggtacccctcacggcacctaacggcatgtatccccctccgccgcagcag
cagccaccacctccagcacctgcggatggaggccctccgcctcccgctcctggcccacca
gcctcagctgcaccgtag
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