Capricornis sumatraensis (Sumatran serow): 138087796
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Entry
138087796 CDS
T10522
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04382
Cornified envelope formation
csum04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
138087796 (COL7A1)
09158 Development and regeneration
04382 Cornified envelope formation
138087796 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
fn3
VWA
VWA_2
Pur_ac_phosph_N
Kunitz_BPTI
Ig_DSCAM-DSCAML_C
DUF4992
Motif
Other DBs
NCBI-GeneID:
138087796
NCBI-ProteinID:
XP_068839227
LinkDB
All DBs
Position
10:96819599..96849921
Genome browser
AA seq
2994 aa
AA seq
DB search
MRLRLLLAALCAGILAGAPRVWAQPRERVSCTRLYAADIVFLLDGSSSIGRSNFREVRGF
LEGLVLPFSGAAGAQGVRFAAVQYSDDPRTEFDLDALGSGGDVIRAIRELSYKGGNTRTG
AAILHVADRVFLPQLARPGVPKVCILITDGKSQDMVDTAAQRLKGQGVKLFAVGIKNADP
EELKRIASQPTSDFFFFVNDFSILRTLLPLVSRRVCTTAGGVPVTLPPDDSTSGPRDLLL
SEPGSQSLRVQWTAASGPVTGYKVQYAPLTGLGQPLPSELQEVSVPAGETSVRLQGLRPL
TEYQVTVVALYANSIGEAVSGTARTTALEGPEVTIQNTTAHSLLVAWRSVPGATGYRVTW
RVVRGGATQQQELGPGQGSVLLRDLQPGTDYEVTVSALLGRSVGPATSLTARTDTSVEQT
LRPVILGPTSILLSWNLVPEARGYRLEWRRESGLEVPQKVVLPSDVTRYQLDGLQPGTEY
RLTLYTLLEGREVATPATVVPTGEELPVGPVTALQATELPGQRVRVSWSPVPSATEYRIT
VRSAQGVERSLVLPGSQTAFDLDDVRAGLSYTVRVSARVGSREGAASILTVRREPETPLA
TPGLRVVASDATRVRVAWGPVPGASGFRISWRTDNGLESSQTVPSDSTATDIVGLRPGTS
YQVAVSALRGREEGPPAVIVARTDPLGPVRSVHVTRVSSSSVTITWNRVPGATGYRISWR
SGRGPEKSQLVSGEATVAELDGLEPDTEYTVRVWARVAGVDGTPASVVVRTDPQPVGSVS
KLQILNASSDVLRVTWVGVTGATAYRLAWGRSEGGPTRQQILPGNTDSAEIRGLEGGVSY
SVRVTALVGDREGAPVSIVVTTPPEAPPALETLRVGQRGEHSLRLHWQPVPGARGFRLRW
RPEGGQEQSRVLGPEVSSYDLDGLEPATHYRIWLSVLGTAGEGPPSEVTAYTESPRVPST
QLRVVDTSVDSVTLAWTPVSGVSSYILSWRPLRGPGQELPGASQTLPGTSTSQRVTGLEL
GISYLFSLTPVRDGVRGPEASITQSPACPHGLMDVVFLVHTTRDNAHRSEAVKRALEHLV
SALGPLGPQAVQVGLLSYSHRPSPLLSLNSSHDLGVILQKIRNIPYTDPSGNNLGTAVVT
AHRYLLAPDAPGRRRHVPGVMVLLVDEPLRGDIFNSIREAQAAGLKVMMLGLAGADPEQL
RRLVPGMDPSQTFFAVDDGPSLELAVSSLAAALCQTALTTQPQPEPCSVHCPKGQKGEPG
QMGLKGQAGPPGPPGLPGRIGAPGPQGPPGSVSAKGERGFPGADGPPGTPGRPGTPGAPG
PKGSPGWAGPRGEPGERGPRGPKGEPGEPGQVTGGESPGLPGQKGDPGPPGPPGSRGPLG
DPGPRGPPGFPGTAVKGEKGDRGERGPPGPGDGTAALGEPGLPGLPGSPGPQGSVGPPGE
KGEKGDCEDGAPGLPGQPGIPGERGLRGPPGDAGPKGDRGLTGAAGEAGEKGERGLPGPV
GPQGPPGVAGRPGPEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGGAGPKGEKGDMGPPGP
KGATGFKGEQGSPGLALPGDPGPKGDPGGRGPIGLTGRAGPPGDSGPPGEKGDPGRPGSP
GPVGPRGRDGEAGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRN
GSPGPSGPKGDRGEPGPPGAPGRLVDVGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASGE
RGISGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGASGPPGPNGATGKAGD
PGRDGLPGLRGEQGPPGPAGPPGAPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGA
PGREGRDGPKGERGAPGSPGLQGPPGLPGQVGPPGQGFPGVPGSSGPKGDRGETGPRGEQ
GLPGERGLRGEPGSLVNAERLLENIGIKTSALREIVETWEESSGGFLPAPERRRGPKGDP
GERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLAVGERGLPGPPGLAGEPGKPGIPGL
PGPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAVDEPGSGLSREQ
GPPGFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGQNGSPGLPGERGVAGPEGKP
GLQGPRGTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVG
LPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPGPVG
PKGEPGPMGTPGQAVVGPPGAKGEKGAPGALAGDLVGEPGAKGDRGLPGPRGEKGEAGRA
GEPGDPGEDGQKGAPGPKGHKGDPGVGVQGPPGPVGPSGLKGDSGPPGPPGPPGIVGFPG
QTGLRGEQGQPGPTGERGLAGAPGREGAPGPLGPPGPPGSAGAPGAPGLKGDKGDTGAGL
PGARGERGEPGVRGEDGRPGLEGPRGLAGPPGSRGERGEKGDPGASGLKGDKGDSAVILG
PPGPRGAKGDSGERGPRGIDGDKGPRGDSGEPGEKGTKGEPGDKGSAGLLGARGLTGPKG
EPGAPGIPGEPGSPGKDGVPGVRGDKGDIGFMGPRGLKGERGIKGACGLDGEKGDKGEAG
PPGRPGLAGRKGELGEPGVPGQAGAPGKEGLIGPKGDRGFDGQPGPKGDQGQKGERGPPG
VGGFPGPRGNDGSSGPPGPPGSIGPKGPEGLQGQKGERGPPGQSVVGAPGAPGTPGERGE
QGRPGPAGPRGEKGEAALTEDDIRGLVRQEMSQHCACQGQYIASGSRPLPSYAADTAGPQ
LHPVPVLRVSHAEEDGQVPPEDDEYEYSEYSEEEYQDPAAPWDDHDPCSLPLDEGSCSAY
TLRWYHRAGAGGTKACHPFIYGGCGGNANRFGTREACEHRCLPQAAHSQGTGTSIPPFQE
GPAQIMSRVRIRAQKPPPPRLGDLGQTPPQTKELIEKPGSGRSPQYGTPRCSLP
NT seq
8985 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcggctcctgctggctgcgctctgcgccgggatcctggcaggggcgccccga
gtgtgggcccagcccagggagagagtgagctgcacgcgcctctacgccgctgacatcgtg
ttcctccttgacggctcctcgtccatcggccgaagcaacttccgcgaagtgcggggtttc
cttgaggggctggtgctgcccttctctggggcagctggggcacagggtgtgcgcttcgcg
gccgtgcagtacagcgacgacccacggacagaatttgacctggatgcgcttggctcaggc
ggcgatgtgatccgtgccatccgagagctcagctacaaggggggcaacacgcgcacaggg
gccgcgattctccacgtggctgaccgcgtcttcctgcctcagctggcccgacctggtgtc
cccaaggtctgtatcctcatcacagatgggaagtcccaggacatggtggacacagctgcc
cagaggttgaaggggcagggagtcaagctgtttgctgtgggcatcaagaatgctgaccct
gaggagctgaagcgaatcgcctcacagccgaccagcgatttcttcttcttcgtcaatgac
ttcagcatcttgaggacactcctgcctctggtttcccggagggtgtgcacaactgctggt
ggtgtgcccgtgaccctgccccccgacgactcgacctctggtccacgagacctgctgctg
tctgagccgggcagtcagtccttgagagtccagtggacagcggccagcggccccgtgact
ggctacaaggtccagtacgcacccctgacggggctgggacagccactgccgagcgagctg
caggaggtgagcgtcccagctggtgagaccagcgtgcggctgcagggtctccggccactg
actgagtatcaagtgacggtggtcgccctctacgccaacagcatcggggaggctgtgagc
gggaccgctaggaccactgctctggaggggccggaagtgaccatccagaacaccacagcc
cacagcctcctggtggcctggcggagtgtgccaggtgccactggctaccgggtgacgtgg
cgggtcgtcaggggtggggccacgcagcagcaggagctgggccctgggcaggggtcagtg
ttgctgcgggacctgcagcctggcaccgactatgaggtgaccgtgagcgctctgcttggc
cggagcgtcgggccggccacctccctgactgcccgcactgacacgtctgtcgagcagacc
ctgcgtcctgtcatcctgggccccacgtccatcctcctctcctggaacctggtgcctgag
gcccgtggctaccggctggagtggcggcgtgagagtggcttagaggtgccacagaaggtg
gtgctgccctctgacgtgacccgctaccagttggatgggctgcagccgggcaccgagtac
cgcctcacactctacacgttgctagagggccgcgaggtggccaccccagcgaccgtggtc
cccactggtgaggagctgcccgtgggccccgtcacagccctccaggccaccgagctgcct
gggcagcgtgtgcgagtgtcctggagcccagttcccagtgccaccgagtatcgcatcact
gtgcgcagcgcccagggggttgagcggagcctggtgcttcctgggagtcagacggccttt
gacttggatgacgtccgggctgggctcagctacacggtgcgggtgtcagcgcgagtaggc
agccgggagggcgctgccagcatcctcactgtccgccgtgagccagaaaccccactggcc
accccagggctgcgggttgtggcatcggacgcaacgcgagtgagggtggcctggggaccg
gttcccggagccagcggatttcggattagctggaggacggacaatggcctggagtccagc
cagacagtcccctcagactctaccgccaccgacatcgtggggctgagacctgggacctcc
taccaggtggccgtgtcggcgctgcgaggaagagaggagggcccccccgcggtcatcgtg
gctcgaaccgacccactgggcccagtgagatcggtccatgtgactcgagtcagcagctca
tctgtcaccatcacctggaaccgggttcctggtgcgacagggtacaggatctcctggcgc
tcaggccgaggcccagagaaatcccagttggtttctggggaggccacggtggccgaactg
gatggactggagccagatactgagtacaccgtccgtgtgtgggcccgtgtggctggtgtg
gatgggacgcctgcctctgtggttgtgagaactgaccctcagcccgtgggcagcgtgtcg
aagctgcagatccttaatgcttccagtgacgttctgcgggtcacctgggtgggggtcact
ggagccacagcctacagactggcctggggccggagcgagggtggccccacaagacagcag
attctcccaggaaacacggactccgcagaaatacggggcctcgaaggcggagtcagttat
tcagtgagagtgaccgcactcgtaggggaccgcgagggcgcgcctgtctccatagtcgtc
accacccctcctgaggctcctccagccctggagacacttcgcgtggggcagcgaggggag
cactcgctgaggctgcactggcagccggtgcctggtgcacgcggcttccgtctgcgttgg
cgacctgagggtggccaggaacagtcccgagtcctggggccggaagtcagcagctatgac
ctggatgggctggagccagcgacccactaccgcatatggctgagcgtcttggggacggct
ggagaagggcccccctcggaagtgactgcatacactgagtcacctcgtgtcccaagcact
caactgcgtgtggtggacacgtcagtcgactcagtgactctggcctggaccccagtgtct
ggggtgtccagctacatcctatcctggcggcctctcagaggccctggccaagaactgcct
ggggcctcacagacacttccggggacctcaacttcccagcgggtgacaggcctagagctg
ggcatctcctacctcttctccctaactcctgtccgggacggtgtacgtggtcctgaggcc
tctatcacacagagcccagcgtgtccccatggcctgatggatgtggtgttcctggtgcac
accactcgagacaacgctcatcgctcagaggctgtgaagcgagccctggagcacctggtg
tctgcactcgggcctctcgggccacaggccgtccaggttggcctcctgtcctacagtcac
cggccctccccactgttgtcgctgaacagctcccatgaccttggcgtcatcctgcagaag
atccgcaacatcccctacacggacccaagcgggaacaacctgggcacagccgtggttaca
gcccacagatacctgctggcaccagatgcgcctggacgccgccggcatgtgccgggggtg
atggttctcctggtggatgagcccttgagaggtgacatcttcaactctatccgtgaggcc
caggctgctgggctcaaagtgatgatgctgggcctggcgggagctgacccagagcagctg
cgtcgtttggtgcctggcatggacccttcccagaccttcttcgctgtggatgatggcccg
agcttggagctggccgtcagtagtctggcagcagccctgtgtcagacagccttgaccaca
cagccacagccagagccttgctcagtgcattgtccaaagggccagaagggggaacccgga
cagatgggcctgaaaggacaagctgggcctcctggcccccccggcctcccgggcaggatt
ggtgctcctggcccccagggacctcctggaagtgtctctgcgaagggcgagaggggcttc
cctggggcagatggacctccaggcacccctggccgccctgggactcctggagcccctggt
ccgaagggctccccagggtgggccggccctcgtggagaaccaggagagcgaggacctcga
ggcccaaagggggagccgggagagcctggacaagtcactggaggtgagagcccagggctt
cctgggcagaaaggggatcctggacctccaggtccccctggatctcgtgggccgttgggg
gacccgggaccccggggtccccccggatttcccggaacagctgtgaagggtgagaaaggc
gatcgtggggagcggggcccccctggaccaggcgacggcactgctgctctgggcgagcct
gggctgccgggtcttcctggaagccctggaccccaaggctcagttggcccccctggagaa
aaaggagaaaagggtgactgtgaagatggagccccgggcctcccaggacaacccgggatc
ccgggtgagcggggccttcggggacctcctggagatgctggccccaaaggcgaccgagga
ctaacaggggccgctggtgaggctggagagaagggtgaacgtggattgcctggcccagtg
ggaccacaggggccgccgggagttgctggacgacctggacctgagggtcctgaagggcca
ccaggaccaaccggccgccgaggagagaagggggagcctggtcggcctggagaccccgca
gtgggacctgggggtgctggacccaaaggagagaagggagatatggggcccccggggccc
aaaggagctaccggattcaaaggggaacagggctcacctggcttggctcttcctggagac
cctggccccaagggagaccctggaggccgaggtcccattggcctcactggcagagcagga
cccccgggtgactcaggaccccctggagagaagggagaccctgggcggcctggttcccca
ggacccgtcggcccccgaggacgagacggtgaagctggagagaagggcgacgagggtccc
ccgggtgacccaggtttgcctggaaaagctggcgagcgtggccttcggggggcgcctgga
gctcgggggcctgtgggtgagaagggagaccagggagatcctggagaggatggacgaaat
gggagccctggaccttctggacccaagggtgaccgtggggagccaggtcccccaggagcc
cctggacggctggtggacgtgggacttggagctggagagaagggagagcctggggaccga
ggacaggagggtccacgaggacccaagggcgaccctggcccccccggagcttctggggag
aggggcatcagtggacttcgggggcctccaggcccacagggggacccaggtgttcggggc
ccagcaggagaaaagggcgaccggggccctcctggcctggatggccgcagcgggctggat
gggaaaccaggagcctctggtccccctgggccgaatggtgccacgggcaaggccggagac
ccagggagagatggacttccgggccttcgaggagaacagggcccccctggccctgctggt
ccccccggagcaccaggaaagccaggcgaggatggcaagcctggcctgaatgggaaaaac
ggagagcccggcgaccctggagaagacgggaggaagggagagaagggagattcgggcgcc
cctggaagagaaggtcgtgacggccccaagggtgagcgtggagctcctggaagccctgga
ctccagggccccccgggcctcccggggcaggtcggccctcccgggcagggcttccctggt
gtcccggggagttcaggtcccaagggtgaccgtggggagactggacccagaggggagcag
ggcctcccaggagagcgtggcctgagaggagagcctgggagcctggtgaatgcagagcgg
ttgctggaaaatattggcatcaagacatctgccctgcgggagatcgtggagacctgggaa
gagagctctggcggcttcctgccagcgcctgaacggcgtcgtggccccaagggggaccca
ggcgagcggggccccccaggcaaggagggccccatcggcttttctggagaacgtggacca
aagggagatcgtggagaccccggccctcaggggccacctggcctggccgtgggggagagg
ggccttcctggacctcccggccttgctggggagcctgggaagcctggtatccctgggctc
cccggcccggctgggagtgtgggggaggctggaagacctggagagaggggagaacgggga
gagaaaggagaacgtggagaacagggcagagacggccttcctggcctccctggacccccc
ggacccccaggccccaaggtggccgtggacgagccaggttctgggctctctagagaacaa
ggaccccctggattcaaaggcgctaagggggatccaggcagtgatggtgaccgaggcccc
aaaggagacaggggtgagccgggcatcaaaggcgaccggggagagcctggacagaggggt
cagaatggcagcccgggtctgccaggagagcgcggcgtggctgggcctgaggggaagccg
ggtctgcaaggtccacgggggaccccaggcccagcgggcggccatggagaccctggacca
cccggggccccgggtcttgctggccctgcgggaccccagggaccttctggcctaaagggg
gagcccggagagacaggaccaccaggacggggcctgcctggacctactggagccgtggga
cttcccgggccccctggcccttcaggcctggtgggtcctcaaggggcaccgggtttgccc
ggacaagtgggggagacggggaagccgggagcgccaggtcgtgatggtgccaccgggaaa
gatggagacagaggagcccccggcgtgccggggtcaccaggtctgccgggccctgtcgga
cctaaaggagagccgggacccatggggacccctggacaggctgtggtcgggccccctgga
gcaaagggagagaagggcgcccctggagcccttgctggagacctggtgggagagccggga
gccaaaggtgaccgaggactgccgggaccgcggggcgagaagggtgaagccggccgtgcg
ggggagcctggagaccctggcgaagatggtcagaagggggctccaggacccaaaggtcac
aagggtgacccaggagttggggtccaggggccccctgggccagttggtccttcaggccta
aagggagactcaggcccccccggaccacccggacctcctggtattgtggggttccccggt
cagacaggccttcgaggagagcaggggcagccgggccccactggagagcggggtttggca
ggtgccccagggagagagggagccccaggtcccttggggccgcctggaccacctgggtca
gcaggagcacctggggcccctggactcaaaggagacaagggggacactggagcagggctg
cctggggcccgaggcgagcgtggggagcctggtgtccggggtgaagatgggcgccccggc
ctggagggaccccgaggactcgcgggccccccaggcagccggggagaacgtggggagaag
ggtgaccctggtgcctcaggactgaagggtgacaagggtgactcagctgtgattttgggg
cctccggggccacggggtgccaagggggactcgggtgaacgagggcctcggggaatagat
ggtgacaaagggcctcggggagacagcggggaacctggagagaagggcaccaagggagag
cctggtgacaagggctcagccgggctgctgggagcgcgtggactcacgggacccaagggt
gagcctggcgccccagggatccctggcgaaccgggatccccaggaaaagacggagtccct
ggtgtccgaggagacaaaggagatattggcttcatgggtccccggggcctcaagggtgaa
cggggaattaagggagcctgtggccttgatggagagaagggagataagggagaggctggt
cccccgggccgcccagggctggcaggacgcaaaggcgagctgggggagccgggtgttcca
gggcaggcaggggcccctgggaaggagggcctgatcggtcccaagggtgaccgaggtttc
gatgggcagccaggacccaagggtgaccagggccagaaaggggagcggggacccccagga
gtggggggcttcccaggtcccaggggcaatgatggctctagtggtcctcccgggccgcct
ggcagcattggtcccaaaggccctgaaggactgcagggtcagaagggtgagcgaggtccc
cctggacagagtgtggtgggcgcccccggggcccctggaacccctggagagagaggggag
caggggcggccaggccccgcggggccccgcggtgagaagggagaagctgcgctgacggag
gatgacatacggggccttgtgcgtcaggagatgagtcagcattgcgcctgtcagggccag
tatatcgcatctggatcacggcctctcccgagttacgcagcagacaccgctgggccgcag
ctccaccccgtgcctgtgctccgagtgtcccacgcagaggaggatggccaggtgcccccc
gaggacgatgagtatgaatactctgagtattccgaggaggaataccaggaccccgcagct
ccttgggatgaccatgatccctgttcgcttccactggatgagggttcctgcagcgcctac
accctgcgctggtatcatcgggctggggcagggggcacgaaggcctgtcaccccttcatc
tacggtggctgcggagggaacgccaaccgttttgggacccgggaggcctgtgagcaccgc
tgcctgccccaggcggcccacagtcaagggacaggtacgagcatacctccattccaggag
gggcctgcccagattatgtccagggtcaggatccgggctcagaagccacccccccccaga
ctgggggacctgggacagaccccgcctcagaccaaagagctgatagagaagcccggctct
gggaggagtccccagtacggtacccctcggtgctccctcccttaa
DBGET
integrated database retrieval system
