Capricornis sumatraensis (Sumatran serow): 138088024
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Entry
138088024 CDS
T10522
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04390
Hippo signaling pathway
csum04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
138088024 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
138088024 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csum03000
]
138088024 (SOX2)
Transcription factors [BR:
csum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138088024 (SOX2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
138088024
NCBI-ProteinID:
XP_068839345
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All DBs
Position
1:complement(191640020..191640982)
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AA seq
320 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRR
KMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTK
TLMKKDKYTLPGGLLAPGGNSMASGVGVGASLGAGVNQRMDSYAHMNGWSNGSYSMMQDQ
LGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMAL
GSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQH
YQSGPVPGTAINGTLPLSHM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccagaagaacagc
ccggaccgagtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcggcgc
aagatggcccaggagaatcctaagatgcacaactcggagatcagcaagcgcttgggcgcc
gagtggaaacttttgtccgagacagagaagcggccgttcatcgacgaggccaagcggctg
cgagcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaaccaag
acgctcatgaagaaggataagtacacactgccgggagggctgctcgccccgggcggcaac
agcatggcgagcggggtcggggtgggcgccagcctgggcgcgggcgtgaaccagcgcatg
gacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggaccag
ctgggctacccgcagcacccgggcctcaacgcgcacggcgccgctcagatgcagcccatg
caccgctacgacgtgagcgccctgcagtacaactctatgaccagctcgcaaacctacatg
aacggctcgcccacctacagcatgtcctattctcagcagggcacccctggcatggcgctt
ggctccatgggctcggtggtgaagtccgaggccagctccagcccccccgtggttacctct
tcttcccactccagggcgccctgccaagccggggacctccgggacatgatcagcatgtac
ctccccggcgccgaggtgccggagcccgccgcccccagcagacttcacatgtcccagcac
taccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcgcacatg
tga
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