Capricornis sumatraensis (Sumatran serow): 138088422
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Entry
138088422 CDS
T10522
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04721
Synaptic vesicle cycle
csum04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
138088422 (RIMS1)
04721 Synaptic vesicle cycle
138088422 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csum04131
]
138088422 (RIMS1)
Membrane trafficking [BR:
csum04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
138088422 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
138088422 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
138088422
NCBI-ProteinID:
XP_068839651
LinkDB
All DBs
Position
11:complement(8192986..8789906)
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AA seq
1678 aa
AA seq
DB search
MSSAVGPRGPRPPTVPPPMPELPDLSHLTEEERNIILAVMDRQKEEEEKEEAMLKCVVRD
MVKPAACKAPRNVEHQPHQPPPRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICH
KTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFF
GSGPQQPSQDGTLSDTATGAGSEAPREKKARLQERSRSQTPLSSAAASAQDQAAPGAQMD
RTKGAEPAPQAGGPEQKQASSRSRSEPPRDRKKTPGLAEQNGKGAPKGERKRAPRTAAPP
AEAPAEERERKERRESRRLEKGRSQDYSVVPEKREEGPVAEAEKQRKEEEYQTRYRSDPN
LARYPVQPPPEEQQMRMHARVSRARHERRHSDVSLPRTEAAAGPEGRPGPRAPHAARGSP
PASPRAYSAERTAEARAPGAQPLADPSPPAPRPGPGPAEVPEPLRKQSRLDPGSAVLVRK
AKREKVETMLRNDSLSSDQSESVRPSPPKPHRAKRGGKRRQMSVSSSEEEGVSTPEYTSC
EDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRT
TMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPG
ATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISV
ISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPYVKMYF
LPDRSDKSKRRTKTVKKVLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQEEESEFL
GEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHPHGESASKKLQRSQRISD
SDMSDYEVDDAIGVVPPVGYRSSTRESKPSTLTVPEQQRTTHHRSRSVSPHRGDDQGRPR
SRLPNVPLQRSLDEIHPTRRSRSPTRHRDASRSPIDQRIREVDSQCLSEQDSELLMLPRA
KRGRSAECLHTTRHLVRHYKTLPPKMPLLETCSHWDIYSSILPARTKTKTLHQECFHSRA
LRFTDEILVGDLQPSLDRARSASTNCLRPDASLHSPERERGRWSPSLDRRRPPSPRIQIQ
HASPENDRHSRKSERSSLQSQTRKGTASDAERVLPPCLSRRGYAAARATDQPVLRGKHPA
RSRSSEHPSVRTLSMHHLAPGGSAPPSPLLTRTHRQASPTRSPPTDAAFSSRRGRQLPQV
PVRSGSIEQASLVVEERTRQMKMKVHRFKQTTGSGSSQELDREQYSKYSAHTDQYRSCDN
VSARSSDSDVSDASAVSRTSSASRLSSTSFLSEQSERPRGRISSFTPKMQGRRMGTSGRA
ITKSTSMSGEMYTLEHNDGSQSDTAVGTVGAGGKKRRSSLSAKVVAIVSRRSRSTSQLSQ
TESGHKKLKSTIQRSTETGMAAEMRKMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADS
QFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMEDKKGQLEVEVIRARSLTQKPGSKSTPA
PYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKC
FMGVAQILLEELDLSSMVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggccgtggggccccggggtccccgcccgcccaccgtgcctcccccgatgccc
gagctgcccgacctgagccacctgaccgaggaggagaggaacatcatcctggcggtgatg
gaccggcagaaggaggaagaggagaaggaagaagccatgctcaagtgtgtggtcagggac
atggtgaagcctgctgcctgcaaagccccaagaaatgttgaacaccagccccaccagcct
ccaccgagattgcatcaacaatttgaaagctataaagaacaagtgaggaaaataggggag
gaagcgcggcgctaccagggagagcacaaggacgatgctccaacctgcgggatttgccac
aagaccaagttcgcggatggctgtggccacctgtgctcctactgccgcaccaagttctgc
gcgcgctgtgggggccgcgtgtctctgcggtccaacaacgaggacaaagtggttatgtgg
gtatgcaatttatgtcgaaagcaacaggaaatcttaaccaagtcaggggcgtggttcttc
ggcagcggccctcagcagcccagtcaggacggaacactcagcgacacggctacaggggcg
ggttccgaggcgcctagagagaagaaagcccggctccaagagcgctccaggtcgcagacc
cctctgagcagcgccgcggcctccgcccaggaccaggctgctcctggcgcacagatggac
aggaccaagggcgctgagcccgccccgcaagccgggggccctgagcagaagcaggcatcc
tccagatctagaagcgagcctcccagggacaggaagaagaccccagggctggccgagcag
aatggcaaaggcgccccaaagggcgagcgcaaacgcgcgcccaggaccgcggcgcctccc
gcagaggcgcccgcggaagaacgcgagcggaaggaaaggcgggaaagccgaaggctggag
aaaggccggtcccaggactactccgtcgtgccggagaaacgcgaggaaggcccggtggct
gaagcggagaagcagcggaaggaggaggagtaccagacccggtaccgcagcgacccgaac
ctggcgcggtaccctgtccagccgccgcccgaggagcagcagatgcgcatgcacgcgcgg
gtgtcccgcgcccggcacgagcggcgccacagcgacgtgtccctgccgcgcaccgaggcg
gccgcggggcccgagggcaggcccggcccgcgcgcgccccacgccgcccgcggctcgccg
cccgcctcgccgcgcgcctactcggccgagaggaccgcggaggcccgggcgccgggcgcc
cagccgctcgccgaccccagcccgccggcgccgcggccaggcccgggccccgcggaggtc
ccggagccgctccggaagcagagccgcctggaccccggctcggccgtcctggtgcgcaag
gccaagcgcgagaaggtggagaccatgctgcgcaacgactcgctcagctccgaccagtcc
gagtctgtgcggccgtcgccgcccaagccgcaccgcgccaagaggggcggcaagcggcgc
cagatgtccgtgagcagctcggaagaagagggtgtgtcaacgccggagtacaccagctgc
gaggacgtggagctggagagcgagagcgtcagcgagaagggtgacttggattattactgg
ctggatcccgccacatggcatagccgggaaacatcacctattagctcgcatcctgtaacg
tggcagccttctaaagaaggggatcgattaattggacgtgttattcttaataagagaaca
accatgcccaaagaatcaggtgcattactgggtctgaaagttgttggaggaaaaatgact
gacttaggacgcctcggtgccttcatcaccaaagtaaagaagggtagccttgcagatgtg
gttggacacttgagagcaggggatgaagttctagaatggaatggtaaacccctgccggga
gctacaaatgaagaagtttacaacattattttagaatcaaaatcagaacctcaagttgaa
attattgtttcaaggcctattggtgacattccaaggattcctgagagctcccatccacca
ctggagtccagttctagttcctttgagtctcagaagatggaaaggccttccatttctgta
atttctcccacaagccctggagctctcaaagatgccccacaagtattaccaggacaactt
tctgttaagctgtggtatgacaaggtgggccaccaactgattgtcaatgttctgcaagcc
acagacctaccccctagagtagatgggcgtcccaggaatccctatgtaaaaatgtatttt
cttccagatagaagtgataaaagtaaaaggagaacgaaaacagtaaagaaagtcctcgag
ccaaagtggaatcagacttttgtctattcgcacgtgcatcgtagagactttagagaacgg
atgttggaaataaccgtgtgggaccagcccagggtgcaggaagaggagagtgagttcctt
ggagagatcctcatagagttggaaacagcgcttctagacgatgagccacattggtataaa
cttcagactcacgacgaatcttcactacctctgcctcagccatcgcccttcatgccgcgg
cgacacccccacggtgaaagcgccagcaagaagctgcaaaggtcccagcgaatcagtgac
agtgacatgtcagactatgaggttgatgatgcgattggagtggtccctccagtaggttat
aggtctagcactcgagaaagcaaaccttcaacattaaccgtgccagagcagcagagaaca
actcatcaccgctcacggtcggtgtctcctcatcgcggcgatgatcaggggaggccacgg
tcacgtttaccaaatgtgccattacagaggagtttagatgaaattcatccaacaagaaga
tcacgttctccaaccagacaccgtgatgcctcccgaagcccgattgatcagagaatcaga
gaagtggacagtcagtgtttatcagaacaagacagtgagcttctcatgcttcccagagca
aaacgaggacgaagtgcagaatgcctacacaccaccagacatcttgttaggcactataaa
acattaccgcctaagatgcccttattagagacctgttctcactgggatatttacagctca
attctgcctgcacgtaccaaaaccaaaacccttcaccaagaatgctttcactcgagagca
ctgaggtttactgatgagattctggttggtgacctgcagccctcccttgacagggcgagg
agtgctagtaccaactgcttgagaccagacgctagtttgcattcaccagaacgagaaagg
ggtagatggtccccctccctagataggagacgacctcctagccccaggattcaaatccag
catgcgtctccggagaatgacaggcactccagaaagtctgaaagatctagcctccaaagc
cagactaggaaaggcactgcctctgatgcagaaagggttctcccaccatgtctttctaga
aggggatacgcagccgcgagagcgactgatcagccagtccttagggggaaacatcccgct
cgctcccgctcgagcgagcaccctagtgtcagaacactgtctatgcaccaccttgccccc
ggagggtccgcgccaccttctccgctcctgacaaggacgcaccggcaggcgagccccaca
cggtccccacccacggatgccgccttcagcagccgccggggcaggcagctcccgcaggtg
cccgtgcgaagcggcagcatagaacaagcaagcttagtagtggaggagcgaacgagacag
atgaaaatgaaagtgcatcgatttaagcagacaacagggtctggttctagtcaagaactt
gatcgcgagcaatattccaagtatagcgcacacacagatcagtacagaagctgcgacaac
gtctccgccagatcctcagacagcgacgtcagcgacgcgtctgccgtgtcccgaaccagc
agtgcctcccgcctcagcagcaccagcttcctgtccgagcagtctgagcggcctcggggc
aggatcagttcatttacccctaaaatgcaaggcagacggatggggacttccggaagagcc
atcaccaagagcacaagcatgagcggagagatgtacacactggagcataatgatggcagc
cagtcggacacagctgtgggcaccgttggagcaggtgggaagaagaggaggtccagcctg
agtgccaaagtggttgccatagtgtctcgaaggagcagaagcacatcccagctgagccaa
acagagtcaggccacaagaagttgaaaagcaccatccagagaagcaccgagacaggaatg
gcagctgagatgaggaagatggtgaggcagccaagccgggagtccacggacggcagcatc
aacagctatagctctgagggaaatttaatatttcctggagtgagactaggcgcagatagt
caattcagtgattttcttgatggattgggaccagcccagcttgttggccgccaaaccctt
gctacccctgcaatgggtgatatacagataggaatggaggataaaaagggccagttagaa
gttgaagtgattagagcacgaagcctcacgcagaaacccggctccaaatccacacctgct
ccttatgtcaaagtgtatcttttggagaatggggcctgcatagccaagaagaagacaaga
attgcacgaaagaccctggaccctttgtaccaacagtccctggtttttgatgaaagtcca
cagggtaaagtccttcaggtgattgtctggggggactatggcagaatggaccacaaatgc
ttcatgggggtggctcagatcttgttggaggaactcgatctttccagcatggtcatcggc
tggtacaagctgtttccaccgtcatcactggttgaccccacactcacccctctgacccgc
cgggcttcccagtcatctctggaaagttccactgggcccccctgcatccggtcctaa
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