Capricornis sumatraensis (Sumatran serow): 138089130
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Entry
138089130 CDS
T10522
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04151
PI3K-Akt signaling pathway
csum04510
Focal adhesion
csum04512
ECM-receptor interaction
csum04820
Cytoskeleton in muscle cells
csum04926
Relaxin signaling pathway
csum04933
AGE-RAGE signaling pathway in diabetic complications
csum04974
Protein digestion and absorption
csum05146
Amoebiasis
csum05165
Human papillomavirus infection
csum05200
Pathways in cancer
csum05222
Small cell lung cancer
Brite
Exosome [BR:
csum04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
138089130 (COL4A2)
Glycosaminoglycan binding proteins [BR:
csum00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138089130 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138089130
NCBI-ProteinID:
XP_068840597
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Position
12:93130378..93287442
Genome browser
AA seq
1710 aa
AA seq
DB search
MDRELRAAARPALRRWLLLGAVTVGLLAQSVLAGVKKLDVPCGGRDCSGGCQCYPEKGGR
GQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVGPRGVSGFPGADGIP
GHPGQGGPRGPPGYDGCNGTMGDSGYAGPPGPGGFLGPRGPQGPKGQKGEPYALSSEDRD
KYRGEPGEPGLVGLQGPPGRPGPVGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKG
EKGDMGLQGPGGIPPDNGYVEKPTPAYELLPEQYKGEKGSEGEPGRIGISLKGEEGVMGF
SGPRGAPGFDGEKGLPGQKGSRGLDGYQGPDGLPGPKGEMGDPGPPGLPAYSPHPSVAKG
VRGEPGSPGVPGEPGARGEPGDPGLPGRPGTTIGDEDEKRGLPGEMGPKGFTGEQGFPAL
YPGPPGAEGKPGLRGPPGRPGPPGPDGFLFGLKGAKGSGGFPGSSGFPGARGQKGWKGDA
GDCKCAGQFIRGPPGLPGPKGFAGANGQPGSKGSQGDPGPHGIPGFSGFKGAPGNVGPPG
PKGMKGDSRTITTKGERGQPGVPGVPGLKGSDGIPGPPGLDGFHGLPGPPGDGIKGPRGD
AGQPGAPGTKGLPGERGPPGLGLPGPRGERGFPGDAGLPGPPGFPGPPGLPGAPGQIDCD
SGVKRPIGADGQAPIQPGCVGGPKGSPGQPGLPGPPGAKGLRGVPGFSGADGVPGFKGLP
GDPGREGFPGPPGFMGPRGSKGAVGPPGLDGLPGASGLPGPVGPPGDRGLPGEVLGAQPG
PRGDSGLPGRPGLKGPPGERGPPGFRGSQGMPGMPGQKGQPGSPGFSGQPGLPGPPGQHG
FPGAPGQEGPLGPPGAPGFEGLPGDRGEPGDSGVPGPLGRKGGSGDRGDPGQQGERGHPG
LPGFKGVSGMPGTPGLKGARGSPGMDGFEGMLGLKGRPGLPGIKGEAGFFGIPGLKGLAG
EPGVKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGLPGMPGIPGLSGI
PGLPGRPGHIKGVKGDTGVPGVPGSPGFPGVPGPPGVMGFQGFTGSRGDKGAPGRAGLFG
EVGATGDFGDIGDTIDLPGSPGLKGERGTTGIPGQKGFLGERGTEGDVGFPGITGLAGVQ
GPPGFQGQKGFPGLTGLQGPQGDPGRAGAPGIKGDSGWPGNPGLPGLPGLRGISGLHGLP
GSKGFPGSPGADVHGDPGFPGPAGDKGDPGEANTLPGPTGAPGQKGERGAPGERGPLGSP
GLQGFPGITPPSNISGSPGDIGAPGIFGLEGYRGPPGPPGPAALPGSKGDEGSPGTPGNP
GIKGWVGDPGPQGRPGVFGLPGEKGPRGEPGFMGNIGPTGSPGDRGPRGPKGDRGLPGAP
GALGAPGIAGIPQRIAVERGPVGPQGRRGPPGAQGEMGPQGPPGEPGFRGAQGKAGPQGR
GGVSAIPGFRGDQGPVGLQGPVGFEGEPGRPGSPGLPGMPGRSISIGYLLVKHSQTDKEP
MCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYYASRND
KSYWLSTTAPLPMMPVAEEEIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIG
YSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYYANKYSFWLTTIPEQ
NFQGAPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggacagagagctgcgcgccgcggcgcgcccagccctacggcggtggctgctgctgggg
gccgtgaccgtggggctgctggcccagagcgtcctggcgggtgtgaagaaactggacgtg
ccttgtggaggcagagactgcagcgggggctgccagtgctaccccgagaaaggagggcgg
ggccagccaggaccagtgggcccccaggggtacaccgggccccctgggctacaggggttc
ccaggactgcaaggccgcaaaggagacaagggcgaaaggggggcccccgggatcacaggc
ccgaagggagacgtgggaccaagaggtgtttcgggattccctggtgccgacggaattcct
ggccatcccgggcaaggcggacccagaggacctccagggtatgatggctgcaacgggacc
atgggcgactcgggctacgcaggacccccgggccccggtggcttcctcgggccccgcggg
ccccaaggaccgaaagggcagaaaggcgagccctacgctctgtcctcagaggaccgtgac
aaatacaggggggaacctggagagcccggactggtcggcttgcaggggcctcccggccgc
cctgggcccgtgggacagatgggtccggttggagccccaggaagaccgggaccacctgga
ccccctggacccaaaggacagccaggcaaccgaggacttggtttttatggagaaaaaggc
gaaaagggagacatggggctgcagggacccggcgggattccaccagacaacggttacgtc
gagaagcccacgccggcatacgagcttctcccagagcagtataagggtgaaaaaggaagc
gagggagaacccgggagaataggcatctccttgaagggagaagaaggcgtcatgggcttc
tcgggaccacggggtgcccccggcttcgatggtgagaagggcttgccgggacagaaagga
agcagaggactggacgggtaccaaggccctgacggattgccaggacccaagggagaaatg
ggcgacccaggcccccccggcctcccagcctactccccgcatccttccgtggccaaaggt
gtcagaggtgagccgggatccccaggagtccccggggagccaggagcccgtggggagcca
ggagaccccggtctgccaggccggccgggcacgaccatcggagacgaagatgagaagaga
ggcttgccgggcgagatgggacccaaaggcttcacaggagaacagggtttccccgcgctg
taccccggccccccgggggccgaagggaagccagggctccggggtccccccgggcgccca
ggaccgcccggcccagatggttttctgttcggcctgaaaggagccaaaggaagtgggggc
ttcccgggctcctccgggttcccaggggctcgtggacagaaaggatggaaaggtgacgcc
ggcgactgtaaatgtgcaggtcagttcatcaggggtcctccaggactgccaggacccaag
ggctttgcaggtgccaacgggcagcctggcagtaaaggcagccaaggagaccccggcccg
cacggcatccccgggttctccgggttcaagggagcccctggtaacgtcggtccccccggg
cccaaagggatgaagggagactccaggaccatcaccaccaaaggtgagcggggccagcca
ggcgtcccaggcgtgccagggctgaaaggtagtgacggcatcccaggaccacccgggctc
gatgggtttcacgggctcccgggccctcccggcgatggcatcaaaggcccccgaggggac
gcgggccaaccaggagcccccggcacgaagggccttccaggggagaggggccccccagga
ctgggcctgccaggccccagaggcgagcgcggcttccccggtgatgctggattgcctgga
ccaccaggcttcccggggcctcccggcctccccggcgctccaggacagatcgattgtgac
tcgggtgtgaaaagacccatcggagcagacggccaggcgcccatccagccaggttgtgtt
ggaggacccaagggatccccaggccagcccggtctccccggccccccaggtgccaaaggc
ctcagaggagttccaggattttcaggagccgacggagtgccagggttcaagggtctccca
ggagatccaggtcgagagggattcccaggacccccagggttcatgggaccccgcggctcc
aaaggcgcagtggggccccccggcctggatggactccctggcgcctccggcctaccgggg
ccagttgggcccccaggggacaggggccttcctggagaagtgctgggggcccagcccggg
ccccggggagactctggactgcctggacgccccggactgaagggccctcccggagagaga
ggcccgcctggcttcaggggaagccagggcatgccagggatgccgggccagaagggccag
ccaggctccccgggattctcgggccagccgggactgccagggccgccaggacagcacggc
ttcccaggagcgcctggtcaggaggggcccctggggcccccgggcgcccccggctttgaa
ggtctgcctggagacagaggggagccgggggacagtggcgtccctggccccctgggcagg
aagggcggctctggggacagaggtgaccctgggcagcagggagagagaggtcaccccgga
ctccccggatttaaaggagtgtctggaatgcctggtaccccgggactgaaaggggccagg
ggctcccccgggatggacggcttcgaaggcatgctcggcctcaagggcagacccgggctc
ccgggaatcaaaggagaggcagggtttttcggaattccggggctgaagggcctggctggt
gagccgggtgtgaaaggcagccgaggagaccctgggcccccaggaccgccccccatcatc
ctgcccggaatgaaagacatcaaaggagaaaaaggagacgaaggccccatgggactgaaa
ggatacctgggcctgaaaggccttcctggaatgccaggcatccccgggctgtcaggaatc
ccagggctgcccgggagacctggccacatcaaaggagtcaaaggagacactggcgtcccc
ggcgtgcccggctccccggggttccctggcgtgcccggcccccccggagtcatggggttc
cagggcttcacgggcagtaggggtgacaagggtgctcccgggagagcaggcctcttcggc
gaggttggcgcaaccggtgacttcggcgacatcggagacacgatagatctgcccgggagc
ccaggcctgaagggggagcggggcaccaccggaataccaggtcaaaagggattcctcggc
gagagaggcactgagggtgatgtcggctttccggggatcaccggcctggctggagtccaa
ggaccccctggattccaagggcaaaaaggctttccaggactcacagggctccaggggcct
cagggagacccgggacgggccggagcgcccggcatcaaaggagactctggctggccaggg
aacccaggcttaccaggtctgcccggcctccgaggcatcagcggattgcacggtttgcca
ggcagcaaaggcttcccgggatccccaggtgcagacgtccacggggaccccggattccca
ggccctgccggggacaagggtgacccaggggaggccaacacccttccaggccccacagga
gccccaggacagaagggcgagcgtggagccccaggggagcgaggcccactcgggagtcct
ggacttcagggctttccaggcatcacccctccctccaacatctctgggtcaccgggggac
atcggcgcgcccgggatattcggcctggaaggttatcgagggcccccggggccgcccggg
cctgcagctcttcccggaagcaaaggtgatgaggggagtccaggaacccccggaaacccc
gggattaaaggatgggtcggcgaccccgggccccagggccggcctggcgtgttcgggctc
ccaggagaaaaagggcccagaggggagccaggattcatgggcaacataggccccaccggg
agcccgggcgaccgaggccccaggggacccaaaggagaccgaggactcccgggtgcccct
ggtgccttgggggctccaggcatcgcaggaatcccccagaggatcgcggtcgagcggggc
ccagtgggtccacagggcaggagaggccccccaggggctcagggagagatggggccgcag
ggcccccccggagaaccaggtttccgtggggcgcagggcaaggccgggccccagggacga
ggcggcgtgtcggccattcccggattccgtggagaccaggggcctgtggggctgcaggga
ccggtgggctttgaaggggagccgggccgccccggaagccccggcctgcccggcatgcct
ggccgaagcatcagcatcgggtacctcctggtgaagcacagccagaccgacaaggagccc
atgtgccccgtcggcatgaacaagctctggagcgggtacagcctgctctacttcgagggc
caggagaaggcccacaaccaggacctggggctggcgggctcctgcctggcacggttcagc
accatgcccttcctgtactgcaaccctggcgacatctgctactacgccagccgtaacgac
aagtcctactggctgtccaccaccgccccgctgcccatgatgcccgtggccgaggaggag
atccggccctacatcagccgctgctccgtgtgcgaggccccggccgttgccatcgcagtc
cacagccaagacgtctccattccccactgcccggccgggtggcgcagcttgtggatcgga
tactccttcctcatgcacacggccgccggtgacgaaggaggcggccagtcgctggtgtcg
ccgggcagctgcctggaggacttccgcgccactccgttcatcgagtgcaacggggcccgc
ggcacgtgccactactacgccaacaagtacagcttctggctgaccaccatcccggagcag
aacttccagggcgcgccctctgccgacacgctcaaggccggcctcatccgcacgcacatc
agccgctgccaggtgtgcatgaagaacctgtga
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