Capricornis sumatraensis (Sumatran serow): 138089499
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Entry
138089499 CDS
T10522
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03082
ATP-dependent chromatin remodeling
csum04714
Thermogenesis
csum05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138089499 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
138089499 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
138089499 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csum03000
]
138089499 (ARID1B)
03021 Transcription machinery [BR:
csum03021
]
138089499 (ARID1B)
03036 Chromosome and associated proteins [BR:
csum03036
]
138089499 (ARID1B)
Transcription factors [BR:
csum03000
]
Eukaryotic type
Helix-turn-helix
ARID
138089499 (ARID1B)
Transcription machinery [BR:
csum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138089499 (ARID1B)
Chromosome and associated proteins [BR:
csum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138089499 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
138089499
NCBI-ProteinID:
XP_068840970
LinkDB
All DBs
Position
13:80495625..80915550
Genome browser
AA seq
2252 aa
AA seq
DB search
METGLLPNHKLKTVGEAPAAAPHQQQHHHHHHHHAHHLQHHHHHHHAHHLHHLHHHALQQ
QLNQFQQQQQQPQQQQQQHQHPISNNNSLSGAGGGTPQPGADMEQPQHGGAKDGAAAGSQ
AEPPGQPLLSKPGDEDDAPPKMGEPAGGRFEQPGLGAQQPPPPPLVAVPGGGGGGPAAVS
EFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGLMHSASAAAGAPNSMDPLQNSHEG
YPNSQYNHYPGYSRPSAGGGGGGGGGGGGGGGGSGGGGGGGGAGGAGAVAAAAAAAAAAA
AAGGGGGGYGGSSSGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGAAAAAAAAAATGG
FQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPDYSSPSAPPPPPPPSQPQSQAAA
AAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSP
MDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRPPGAMGGMQYPQ
QQMPPQYGQQGVSGYCQQGQQPYYNQQPQPPHLPPQAPYLPSQSQQRYQPQQDMSQEGYG
TRSQPPLASGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQG
DQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPG
SQSESSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHPGISS
FQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPSMGVNANSQMHGQGPSQP
CGTMPLGRVPSTGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVM
QAAANSAQSRQGGFPGMNQSGLMASSSPYSQPMNNSSGLMNTQAPPYSMTPNMVNSSTAS
MGLADMMSPSESKLPLPLKADGKEEGSAQPEGKSKDSYSSQGISQPPTPGNLPVPSPMSP
SSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYL
TFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSA
ASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQS
TGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTVSVHDPFSDASESSFPKRNSMTPS
TPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPTSSMQDMYNQSPSGA
MSSLGMGPRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPSYGGHQPGLYPQQTNYKRHMD
GMYGPPAKRHEGDMYNMQYGSQQQEMYNQYGSSYSGPDRRPLQGQYPYPYNRERMQGPGQ
IQPHAIPPQMMGGPMQSSSSEGPQQSMWATRNDMPYPYQNRQGPGGPTQAPPYPGMNRTD
DMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQSSYQTPPSLPNHISRAPSPA
SFQRSLESRMSPSKSPFLPSMKMQKVLPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQ
PVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLS
GFLELLVEYFRKCLIDIFGILTEYEVGDPSQKALDHNAAKRDDSQSLTDDSGREEEDAEC
IEDEEDEEDEEEEDSGRAETEDRSSTAVASPDATADPKEKPRQASKFDRLPIKIVKKNNL
FVVDRSDKLGRVQEFTSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSTGRKK
DQEGKGDSDEHQEKSIIATIDDVLSARPGALPEDANPGTQTESSKFPFGIHQAKSHRNIR
LLEDEPRSRDEAPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGK
LILLHHEHPERKRAPQTYEKEEDEDKGVACSKAEWWWDCLEVLRDNTLVTLANISGQLDL
SAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVD
LILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIG
NLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLL
HEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
6759 nt
NT seq
+upstream
nt +downstream
nt
atggagacggggctgctccccaaccacaaactgaaaaccgttggcgaagcccccgccgca
gcgccccaccagcagcagcaccaccaccatcaccaccaccatgcccaccacctccaacac
caccaccaccaccaccatgcccaccacctccaccacctccaccaccacgcactacagcag
cagctaaaccagttccagcagcagcagcagcaaccacagcagcagcagcagcagcaccaa
catcccatttccaacaacaacagcctcagcggcgcgggcggcggcacgcctcagcccggt
gccgacatggagcagccgcaacatggaggcgccaaggacggtgccgccgcgggcagccag
gccgagcccccgggccagccgctgctgagcaagccgggcgacgaggacgacgcgccgccc
aagatgggggaaccggcaggcggccggttcgagcagccgggcctgggcgcgcagcagccg
ccgccgccgccgctggtcgccgtgcccgggggcggcggaggcggcccggcggccgtctcg
gagtttaataattactatggcagcgctgccccagctagcggcggccccggtggccgcgct
gggccttgctttgatcaacatggcggacaacaaagccccgggatggggctgatgcactcc
gcctcagctgccgccggagcccccaacagcatggaccccctgcagaactcccacgaaggg
taccccaacagccagtacaaccattatccgggctacagccggcccagcgcgggcggcggc
ggcggcggcggcggtggaggaggaggaggaggaggaggcagcggaggaggaggaggagga
ggaggagcaggaggagcgggagctgtggcggcggcggccgcggcggcggcggcagcagca
gcagcaggaggcggcggcggcggctatgggggctcgtcctcggggtacggggtgctgagc
tccccccggcagcagggcggcggcatgatgatgggccccgggggcggcggggccgcgagc
ctcagcaaggcggccgccggcgcggcggcggcggcagcggcggcggcggcgacggggggc
ttccagcgcttcgccgggcagaaccagcacccgtcgggggccaccccgaccctcaaccag
ctgctcacctcgcccagccccatgatgaggagctacggcggcagctacccggactacagc
agccccagcgcgccgccgccgccgccgccgccgtcgcagccccagtcccaggcggcggca
gcggcggcgggggcggcggcgggcggccagcaggcggccgcgggcatgggcttgggcaag
gacatgggcgcccagtacgccgctgccagcccggcctgggcggccgcacaacaaaggagc
cacccggcgatgagccccggcacccccggcccgaccatgggcagatcccagggcagccca
atggatcccatggtgatgaagagaccccagctgtatggcatgggcagtaaccctcattct
caaccacagcagagcagcccttaccctggaggttcctatggccccccaggcccgcagcgg
tatcccatcggcattcaaggtcggcccccgggggccatgggaggcatgcagtacccccag
cagcagatgccacctcagtacggacagcagggtgtgagtggttactgccagcagggccaa
cagccttactacaaccagcagccgcagcctccgcaccttcccccgcaggcgccatatctg
ccctcccagtcccagcagaggtaccagcctcagcaggatatgtctcaggaaggctatgga
actaggtctcaacctcctctggcttctggaaaacctaaccatgaagacttgaacttaata
caacaagaaagaccatcaagtttaccagacctgtctggctccattgatgacctccccacg
ggaacggaagcaactttgagctcagcagtcagtgcatctgggtccacgagcagccaagga
gatcagagcaacccagctcagtcacctttctctccacacgcatctccccatctctccagc
atccctgggggcccatcgccttctcctgtcggctctcctgtaggaagcaaccagtcacga
tctggcccaatttctcctgccagtattccaggaagtcagatgcccccccagccacctggg
agccagtcagaatccagttctcatcctgccttgagccagtcaccaatgccacaggaaaga
ggttttatggcaggcacgcaaagaaaccctcagatgtctcaatatggacctcagcagaca
ggaccatccatgtcgcctcatccttctcctggaggccagatgcaccctggaatcagtagc
tttcagcagagtaactcaagtggaacttacggtccacagatgagccagtatggaccacaa
ggtaactactccagacccccaacatacagtggggtacccagtgcaagctacagcggccca
gggcccagcatgggcgtcaatgccaacagccagatgcatggacaagggccaagccagcca
tgtggcaccatgcccctgggacgagtgccatccacaggcatgcagaacagaccatttcct
ggaaacatgagcagcatgacccccagttctcctggcatgtctcagcaaggggggccagga
atggggccaccaatgccaaccgtgaaccgtaaggcacaggaggcagctgccgcagtgatg
caggccgctgcgaactcggcgcaaagcaggcaaggcggctttcccggcatgaatcagagt
ggactcatggcttccagctcaccctacagccagcccatgaacaacagctctgggctaatg
aacacccaggcgcccccctacagcatgacgcccaatatggtgaacagctcaacagcatct
atgggtcttgcagatatgatgtctcctagtgaatccaaactgcccttgcctctcaaagcc
gacggtaaagaagaaggcagtgcacagccggagggcaagtcgaaggatagctacagctct
cagggtatttctcagcccccaacccccggcaacctgccagtcccttccccaatgtccccc
agctctgctagcatctcctcatttcatggagatgaaagtgatagcattagcagcccaggc
tggccaaagactccatcaagccctaagtctagctcatccaccaccactggagaaaagatc
acaaaggtgtatgagctggggaatgagccagagaggaagctgtgggtggaccgctacctc
accttcatggaggagaggggctccccggtctcaagtctgcctgcggtgggcaagaagccc
ttggacctattccgactctatgtctgcgtcaaagagatcggcggtttggcacaggttaat
aaaaacaagaagtggcgtgagctggcaaccaacctaaatgttggcacttcgagcagtgca
gcaagctccctgaaaaagcagtatattcagtacctgtttgcctttgagtgcaagatcgag
cgtggggaggagcccccgccggaagtcttcagcacaggcgacaccaagaagcagcccaag
ctccagccgccatctcctgctaactcaggatccttgcaaggtccacagaccccccagtca
actggcagtaattcgatggcagaggttccaggtgacctgaagccgcctactccagcctcc
acccctcatggacagatgaccccaatgcaaggtggaaggagcagcactgtcagtgtgcac
gacccattctcggacgcaagtgagtcatcgttccccaaacgcaactccatgactccaagc
accccgtaccagcagggcatgagcatgccagacgtgatgggcaggatgccctatgagccc
aacaaggacccctttggagggatgaggaaagtgcctggaagcagcgagcctttcatgacg
caaggacagatgcccaccagcagcatgcaggatatgtacaaccagagtccgtctggagcc
atgtctagtctgggtatggggccgcggcagcagtttccctatggggccagttatgaccga
aggcatgaaccttacgggcagcagtacccgggccaaggccctccctcaggacagccgtca
tatggaggacaccagccgggcctgtacccacagcagacgaactacaagcgccatatggat
ggcatgtacgggcctccagccaaacgccacgagggagacatgtacaacatgcagtatggc
agccagcagcaggagatgtacaaccaatacgggagctcctactccggcccagaccggagg
cccttgcagggacagtatccatacccctacaaccgagagaggatgcagggcccggggcag
atacagccgcacgccatcccgccccagatgatgggcggcccgatgcagtcgtcctccagc
gaagggcctcagcagagcatgtgggcgacccgcaacgatatgccttatccctaccagaac
aggcaaggcccgggcggccccacacaggccccgccttatcccggcatgaaccgcaccgat
gacatgatggtccctgatcagaggataaaccacgagagccagtggccttcccacgtcagc
cagcgtcagccttacatgtcctcatcagcctccatgcagcccatcacgcgcccgcctcag
tcgtcctaccagacgccaccctcactgccaaaccacatctccagggctcccagccccgcc
tccttccagcgctccctggagagccgcatgtctcccagcaagtcccccttcctcccctcc
atgaagatgcagaaggtcctgcccaccgtccccacgtcccaggtcaccgggccgcccccc
cagccgccccccatcagaagggagatcactttccctcctggctccgtggaagcctcacag
ccagtcctgaaacaaaggcgaaagattacctcaaaagatatcgttactccagaggcctgg
cgtgtgatgatgtcccttaagtcaggtcttttggctgaaagtacttgggctttggacact
attaatattcttctatatgacgacagcactgtcgctactttcaatctctcccagttgtcc
ggatttctcgagcttttagtagagtacttcaggaaatgcctgattgacatttttggaatt
cttacggaatatgaagtgggagaccccagccaaaaagcacttgatcacaatgcggcaaag
agagatgacagccagtccttgactgatgattctgggagagaggaagaagatgctgaatgt
attgaggacgaggaggacgaggaggacgaggaggaggaagacagcgggagggcggagacg
gaggacaggagcagcacggctgtggcctcccctgacgccaccgcagacccaaaggagaag
cccaggcaagccagtaaatttgacaggctgccaatcaagatagtcaaaaagaacaacctg
tttgtcgtcgaccgctctgacaagctgggtcgcgttcaggagttcaccagtggacttctg
cactggcagctcggcgggggagacaccactgagcacatccagactcacttcgagagcaag
atggagattccccctcgcaggcggccgcctccccctttgagctccacaggcagaaagaaa
gaccaggaaggcaagggggattctgacgagcaccaagagaaaagcatcatcgcaaccatc
gatgatgtcctgtctgctcggccaggggctctgcccgaagatgcaaaccctggtacccag
accgaaagcagcaagtttcccttcggaatccatcaagccaaaagtcaccgcaacatcagg
ctgctggaggacgagccaaggagccgggacgaggccccgctctgcaccatcgcacactgg
caggactcgctggccaagcgctgcatctgcgtgtccaatattgtccggagcttgtctttt
gtgcctgggaatgacgcggaaatgtccaaacacccaggcctggtgctgatcctggggaag
ctgattcttcttcaccacgagcatcccgagagaaaacgagcgccgcagacctatgagaag
gaggaagacgaggacaaaggggtggcctgcagcaaagctgagtggtggtgggactgcctc
gaggtcttacgggacaacacgctggtcaccttggccaacatttctgggcagctagacttg
tccgcttacacggaaagcatctgcttgccaattttggatggcttgctgcactggatggtg
tgcccatcagcagaggcacaagacccctttcccacggtgggacccaactctgtcctgtcg
cctcagagactcgtgctggagacgctctgtaaactcagcatccaggacaacaatgtggac
ctgatcttggccacgcctccgtttagtcgtcaggagaaattctatgccacattagttagg
tacgttggggatcgcaaaaacccagtctgtcgagaaatgtccatggcgcttttatcgaac
cttgcccaaggggacgcactggctgcaagggccatagctgtgcagaagggaagcatcgga
aacttgataagcttcctagaggatggggtcacgatggcccagtatcagcagagccagcac
aacctcatgcacatgcagcccccgcccctagagccccccagcgtggacatgatgtgcagg
gcagccaaggccctgctggccatggccagagtggacgagaaccgctccgagttccttctg
cacgagggccgattgctggatatctcaatatcagccgttctgaactctctggtggcgtct
gtcatctgcgacgtactgtttcagatcgggcagttatga
DBGET
integrated database retrieval system
