Capricornis sumatraensis (Sumatran serow): 138089508
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Entry
138089508 CDS
T10522
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03015
mRNA surveillance pathway
csum05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138089508 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
138089508 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138089508 (HBS1L)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
138089508 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
138089508
NCBI-ProteinID:
XP_068840987
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All DBs
Position
13:complement(60476287..60563059)
Genome browser
AA seq
686 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSAVEPVEEYDYE
DLKEFSSSLVNHQLSGIDQARLYSCLDHMREVLGDAVPDDILIEAVLKNKFDVQKALSVV
LEQDKVQNLKVRSEGAISTGKTAKGKSIDSQSSQSESEIVPKVTKMTVSGKKQTMGFEVP
RVTAEENGHSFHTPQKGHSSEDTNLVSSDVLESASKSALPSHTIQASEEQSSTPTPVKKS
SKLRQQIDIKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQE
SKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITG
AAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLVVAVNKMDQVNWQQERF
QEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTGWYKGLCLLEQIDSFK
PPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHD
EPVDWAAAGDHVSLTLVGMDIIKINVGCIFCVPKEPIKVCTRFRARILIFNIEIPITKGF
PVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKD
FKELGRFMLRYSGSTIAAGVVTEIKD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgac
ctctatggccagtctgtagaggatgattattgtatttcgccatcaacagctgctcagttt
atttactcacgacgtgacaaaccttcagctgttgaacccgtagaagaatatgattatgaa
gatttgaaagaattctccagttctcttgtgaatcatcagctaagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
atattgattgaagcagttctgaagaacaagtttgatgtgcagaaggctttgtcagtggtt
ctggagcaagataaagtgcagaatttgaaagtcaggagtgagggagcaatatctacagga
aagacagcaaaaggaaaatcaatagattcccagtcatctcaaagtgaatctgaaattgtg
ccaaaagttactaagatgactgtatctggaaagaagcaaactatgggatttgaagtgccc
agagtaactgctgaagaaaatggtcatagtttccacacacctcaaaaagggcattctagt
gaagataccaaccttgtttcttctgatgtacttgagagtgcttctaaatcagctcttcca
tcccacaccattcaagcatcagaagagcagagttcaacaccaactccagtgaaaaagtct
agcaagctgaggcaacaaatagatatcaaagcggaactggagaagcggcaaggaggaaag
cagctcctcaacctagtggtcattggtcatgttgatgctgggaaaagtactctgatggga
catttgctttatcttctgggtgacgtaaacaaaagaactatgcataagtatgaacaagag
tctaaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggtgaa
gaaagggaaaggggggtaacaatggatgttggtatgacaaagtttgagaccaaaaccaaa
gttattacattaatggatgctccaggccataaggatttcattccaaatatgattacagga
gcagcccaggcagatgtagctgttttagttgtagatgccagcaggggagagtttgaagct
ggatttgagactgggggacaaacacgagagcatggactcttggttcgttctcttggagtg
acccaactcgtagttgcagtcaataaaatggatcaggttaattggcaacaagaaaggttt
caagagattactggaaaacttgggcactttcttaagcaagctggttttaaggaaagtgat
gtagcttttatccctacaagtggtctcagtggtgaaaatctaatcacaagatctcagtca
agtgaacttacaggatggtataaaggactatgtttattagaacaaattgattccttcaag
cctcctcaaagatctatagataagccttttagattatgtgtatctgatgttttcaaagat
caaggatctggattttgtgtaactggtaaaattgaagctggttatatccaaactggtgac
cgactactagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcacgat
gaacctgttgactgggcggcagcaggggatcatgttagtcttacgttggttggaatggac
atcatcaaaatcaatgttggctgcatattttgtgtccccaaagaacccattaaggtgtgc
actcgtttcagagcccgaatcctcatctttaatattgaaattcctatcactaaaggattt
cccgtgctgttacactaccaaaccgtcagtgaacccgctgttattaaaagattgattagt
gtcttaaacaaaagcactggtgaagtcacaaagaaaaagcctaaattgttgaccaaaggc
cagaatgcattagtggagctacagacacaaagaccagtggctcttgagctgtacaaagac
tttaaagagctggggagatttatgctgcgctacagtggttctaccatagctgctggtgta
gtgactgagataaaagattga
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