Capricornis sumatraensis (Sumatran serow): 138090236
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Entry
138090236 CDS
T10522
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csum04515
]
138090236 (CLSTN1)
Cell adhesion molecules [BR:
csum04515
]
Cadherins
Cadherin related
138090236 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
CDC45
FAM176
Glyco_hydro_16
Toxin_R_bind_N
EphA2_TM
Cadherin_C_2
V_ATPase_I
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
138090236
NCBI-ProteinID:
XP_068841841
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All DBs
Position
14:51099542..51145729
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AA seq
976 aa
AA seq
DB search
MQPVGCRSGGENPAVLLSRAMKGFAEFNKHKPWLEPTYHGLVTESDSTVLLDPPLIALDK
DAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSTEKLDCELQKDY
TFTIQAYDCGKGPDGANVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVVEGRQYDSILR
VEAVDADCSPQFSQICSYEIVTPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGK
KRAAEDVLVKISIKPTCTPGWQGWNSRVEYEPGTGALTLFPNVHLETCDESVASVQVVVE
LETSHIGKGCDRDTYSEKSLHRLCGAASGTAELLPSPGGSWNWTVGLPTDNGHDSDQVFE
FNGTQVVRVPDGIMSVNPKEPFTISVWMRHGPFGKKKETILCSSDKTEMNRHHYSLYVHG
CRLVFLLRQDPSEEKKYKPAEFHWKLSQVCDEEWHHYVLNVEIPSVTLYVDGVPHEPFSV
TEDYPLHPSKIETQLVVGACWQEYSGVESDNETEPVPLASAGGDLRMTQFFRGNLAGLTI
RSGKLTDKKVIDCLYTCKEGLDLHTPEDNGRGVKIQANPSQSMLTLEGEDVAELDKAMQH
ISYLNSRQFPTPGIRRLKITSTVKCFNEAACISIPPVDGYVMVLQPEEPKISLSGIHHFA
RAASEFESSEGVFLFPELRIISTITREVEPEGEGDEDPTVQESLVSEEIVHDLDTCEVTV
EGEELNGEQESLEVDAARLQQKGIEMSSSDMGVVFTGVDTMASYEEILHLLRYRNWHTRS
LLDRKFKLVCSELNGRYVSNEFQVEVNVIHTANPMEHASHIAAQPQFVHPEHRSFIDLSG
HNLANPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWD
DSALTITVNPMETYEDQHSSEEEEEEEEEESEDGDEEDDITSAESESSEEDEGEHGDPQT
ANRQQQLEWDDSTLSY
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgtcggctgcaggagtggaggtgagaacccagctgtcctgctaagccgggcc
atgaaaggatttgcagaattcaacaagcacaagccatggctggagcccacatatcatggc
ttagttacggagagcgacagcaccgtgctcctcgacccccctctcatcgccctggacaaa
gacgctcctttgcgcttcgcagagagttttgaggtgacagtcaccaaagaaggtgagatt
tgtggatttaagattcacggacagaatgtgccctttgacgcagtggtggtggataaatcc
actggcgagggggtcattcgctccacagagaagctggactgtgagctgcagaaggactac
acgttcaccatccaggcctatgactgtgggaaggggccagatggggccaatgtaaaaaaa
tctcacaaagcaactgtccacattcaggtgaacgatgtcaacgaatatgcgcccgtgttc
aaggagaagtcctacaaagccacagtggtggaggggaggcagtacgacagcatcttgagg
gtggaggcggtggacgcagactgctccccccagttcagccaaatctgcagctatgagatc
gtcaccccggatgtgccattcactgtcgacaaagatggttacataaaaaacacagagaag
ctgaactatggtaaagagcaccagtacaagctgactgtcacggcctatgactgcgggaag
aaaagagcggcagaagacgttttggtgaagatcagcatcaagcccacctgcacccctggg
tggcaaggatggaacagcagggtcgaatacgagcctggcaccggcgctctgacactcttt
ccgaatgtccacctggaaacgtgtgacgagtcggtggcctcggtacaggtagtggtggag
ctggagaccagccacatcgggaagggctgtgaccgtgacacctactccgagaaatcactt
caccggctctgcggtgctgcgtctggcacggctgagctgctgccttccccaggaggctcc
tggaactggaccgtcggccttcccacggacaacggccatgacagcgaccaggtcttcgag
ttcaacggcactcaggtggtgagggtcccggatggcatcatgtccgtcaaccccaaggag
ccctttacgatctctgtgtggatgaggcacgggccatttggcaagaagaaggagacgatt
ctttgcagctcagacaaaacagagatgaaccgacaccattactcactctatgtccacggc
tgccggctggttttcctcctccgtcaggatccttcagaagagaagaaatacaaacctgca
gagttccactggaagctgagtcaggtctgtgatgaggaatggcatcactatgtcctcaac
gtggaaatccccagtgtgaccctctacgtagacggtgtccctcatgagcccttctctgtc
actgaagattacccacttcatccatccaagatcgaaacccagctcgtggttggggcttgc
tggcaagagtattcaggagttgaaagtgacaatgaaactgagcctgtgcctctggcctcc
gcaggtggtgacttgcgcatgacccagtttttccgaggtaatctggctggcctgaccatc
cgttctgggaagctcacagataagaaggtgattgactgtctgtatacctgcaaagagggg
ctagatctgcacacccccgaagacaatggcagaggtgtcaagatccaggccaaccctagt
cagtcgatgttgacgttggagggagaggacgtggcggagcttgataaggccatgcaacac
atttcctaccttaattcacgacagttccccaccccagggatccgaagactcaaaatcacc
agcacagtcaagtgttttaacgaggccgcctgcatctccattcccccggtggatggctac
gtgatggttttgcagccagaagagcccaaaatcagtctgagcggcatccaccattttgct
cgagcggcttctgaatttgaaagctcagagggggtcttcctcttccctgagcttcggatc
atcagcaccatcacgagagaagtggagcccgaaggggaaggggatgaggacccaacagtt
caagagtcactggtgtcggaggagatcgtgcacgacctggacacctgtgaggtcacagtg
gagggagaagaactgaatggagagcaggagagcctggaggtggacgcggcccgcctgcag
cagaagggcatcgaaatgagcagttctgacatgggcgtggtcttcacaggtgtcgacacc
atggccagctacgaggagatcttacacctcctgcgctatcggaactggcacaccaggtcc
ttgcttgaccgcaagttcaagcttgtctgctctgagctgaatggtcgctatgtcagcaat
gagttccaggtggaggtgaatgtcatccacacggccaaccccatggagcacgccagccac
atagccgcccagccgcagttcgtccatcccgagcaccgctccttcattgacctctctggt
cacaacctggccaacccccacccgtttgcagtcgtccccagcactgccaccgtcgtcatt
gtggtgtgcgtcagcttcctggttttcatgatcatcctgggggtgttccggatccgggct
gcacaccagaggaccatgcgagaccaggacaccgggaaagagaacgagatggactgggac
gactctgccctgaccatcaccgtgaaccccatggagacatacgaggaccagcatagcagt
gaggaggaagaggaggaggaggaagaggagagcgaggatggggacgaggaggacgacatc
accagtgccgagtcggagagcagtgaggaggacgagggggagcacggggacccgcagact
gcgaaccggcagcagcagctggagtgggacgactccaccctcagctactga
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