Capricornis sumatraensis (Sumatran serow): 138090483
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Entry
138090483 CDS
T10522
Symbol
SMG7
Name
(RefSeq) LOW QUALITY PROTEIN: nonsense-mediated mRNA decay factor SMG7
KO
K14409
protein SMG7
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138090483 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138090483 (SMG7)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
138090483 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
138090483 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
138090483
NCBI-ProteinID:
XP_068842201
LinkDB
All DBs
Position
14:71802679..71856051
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AA seq
1216 aa
AA seq
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MRNWMFLQIVIVGENVSFKSQMRTGNLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWT
SRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANL
SLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC
QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCR
SIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSP
LREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQL
LALFMSFLGILCKCPLQNKSQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWP
WLISLLNSFHPHEEDLSSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQ
RQIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQDTTI
IESLAADGNPGLKSVLSTGRNLSNSCDTGEKPVVTFKENIKPREANRDQGRSFPPKEVRR
TXSKGVAVTKNDGKDDDNERETETRRGTLEKAQETGRQSAALQVKSQTELRKTPVSEARK
TPVTQTPSQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSV
PGTFLQPAAHSPAGNQVQAGKQSHIPYSQQRPSGPGPVTQGPQQPQPPSQQPLPPLPAPP
AAQTASQLQVQALAQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLG
KIMPVKQPYYLQTQDPIKLFEPSLQPPVRQQQPLEKTMKPFPMEPYNHNPSEVKIPEFYW
DSSYSTADNRAVMAQQASVDRRGKRSPGVFRPEQDPAPRMPFEDPKGSPLLPPDLLKSLA
ALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQ
ERYPNNSVFNEVYGKNLTPSSKAELNPSMAPQETSLYSLFEGTPWSPSLPASSDHSTPAS
QSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYL
SAASSSESSWHQASTPSGSWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQ
QKQKQQRGQGAMNPPH
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattggatgttcttgcagatagtcattgtgggagaaaacgtttcatttaagtcc
cagatgaggaccggaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcag
gcagaagtcctgaaggctgacatgacagattctaagctgggtccagccgaagtctggaca
tccaggcaggctctgcaggacctgtaccagaaaatgcttgttactgatttggaatacgct
ttagacaagaaagtagaacaggatctctggaatcatgcctttaagaatcagatcacaaca
ctacaaggccaggcaaagaatcgagcaaacccgaatcggagtgaagttcaggcaaacctt
tctctgttcctagaggcagctagtggcttctatactcagttattacaagaactgtgtaca
gtgtttaatgtagatttaccatgccgtgtgaagtcttcccagttgggaattatcagcaat
aaacagacgcataccagcgccatagtgaagccacagtctagctcctgttcctatatctgc
cagcactgcctcgttcaccttggagacattgctcgatacagaaaccagaccagccaggcg
gagtcctactataggcatgcggctcagcttgtcccctccaatggtcagccttacaatcag
ttggctatcttagcttcttccaaaggagaccatctgactacaattttctactactgcaga
agcattgctgtgaagttccctttcccagctgcctctactaatctacaaaaagcactttct
aaagcactggaaagccgggatgaggtgaaaaccaaatggggtgtttctgacttcatcaag
gcctttattaaattccatggtcatgtgtacctgagtaagagcttggaaaagttgagccct
cttcgagagaagttggaagaacagtttaagaggctgctattccagaaagctttcaactct
cagcagttagttcacgtcactgtcattaacctgtttcaacttcatcaccttcgtgacttt
agcaatgaaacagagcagcatagttatagccaagatgagcagctgtgttggacacagttg
ctggctctctttatgtcttttcttggcatcctgtgcaagtgtcctctccagaacaagtct
caggaggaatcctacaatgcctatcccctacctgccgtcaaggtgtccatggactggctg
agactcagacccagggtgtttcaggaggcagtggtagatgaaagacagtacatttggccg
tggctaatttctcttctgaacagtttccatccccatgaagaagatctttcaagtactaat
gcaacaccacttccagaggagtttgagttacaaggattcttggctttgagaccttctttc
aggaacttggatttttccaaaggtcatcagggtattacaggcgacaaagagggtcagcaa
cgacaaatacgacagcagcgtttgatctctataggcaaatggattgcagataatcagcca
aggctgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaatcccagag
ttaatactggaagaccccagtgaagccaaagagaacctcattctgcaagacacaaccatc
atagagtccctggcagctgatgggaacccaggactgaaatcagtgctgtctacgggccgg
aatctaagcaacagctgtgacacaggagagaaaccagtggtcaccttcaaagagaacatt
aagccacgagaagcgaacagagaccaaggaagaagttttcctcccaaagaggtgagaagg
acgngtagcaaaggagtagctgtgactaagaatgacggaaaggacgacgacaacgagagg
gaaacagagaccaggagaggcaccctagaaaaggcgcaggaaacaggaaggcagagtgcg
gcactgcaggtaaaatctcagacagagttaagaaagactccagtgtctgaagccaggaaa
acacctgtaactcaaaccccaagtcaagcaagtaactcccagttcatccccattcatcac
cctggagccttccctcctcttcccagccggccagggttcccgcccccaacatatgttatc
ccccctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtttctgtc
ccaggaaccttccttcagcctgcagctcactctccagcaggaaaccaggtgcaagctggg
aaacagtcccacatcccttacagccagcagcggccctccggaccagggcccgtgacccag
ggaccccagcagcctcagccgccgtcccagcagcccctcccacctctccccgctccgcca
gcagcacagactgcaagccagctgcaggttcaagctctagctcagcagcagcagtcccct
acaaaagctgtgccggctttggggaaaagtcctcctcaccactctggattccagcagtat
caacaggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccattaggg
aaaatcatgcctgtgaaacagccctactaccttcaaacccaagaccccataaaactgttt
gagccgtcgttgcaacctcctgtaaggcagcagcagcctcttgagaaaacgatgaagcct
ttccccatggagccatataaccacaacccctcagaagtcaagatcccggagttctactgg
gattcttcctacagcactgctgataacagagctgtgatggcgcagcaagccagtgtggac
cgcaggggcaaacggtccccgggagtcttccgtccagaacaggaccctgcgcccaggatg
ccatttgaggaccccaaaggctcccctctgcttcctccggacctgttaaagagtctggct
gccttggaggaagaggaagagctgattttttctaaccctcctgatctttacccagctctg
ctggggcctctcgcctctcttcctggacgaagcctctttaaatccttattggagaagccc
tcagagctcatgtcacattcatcttctttcctgtctctcaccggattctccctcaatcag
gaacgatacccaaataacagtgtgttcaatgaggtatatgggaaaaacctgacacccagc
tccaaagcagaacttaatccctcaatggctccccaggaaacatcattgtactcccttttt
gaagggactccatggtctccatctcttcctgccagttcagatcattcaacaccagccagc
cagtctcctcattcctccaacccaagcagcctgccaagctcccctccaacacacaaccac
aattctgtcccattctccaattttggacccattgggactccagataacagggataggaga
actgcagaccggtggaaaactgataagccagccatgggtgggtttggcatcgattatctc
tcagcagcatcatcctctgagagcagttggcatcaggccagcactccaagtggctcctgg
acaggccatggcccatccatggaggattcttctgctgtcctcatggagagcctaaagtct
atctggtccagttccatgatgcatcctggaccttccgctttggagcagctgttaatgcag
cagaagcagaaacagcagcggggacaaggcgccatgaatcctccacactga
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