Capricornis sumatraensis (Sumatran serow): 138091076
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Entry
138091076 CDS
T10522
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03008
Ribosome biogenesis in eukaryotes
csum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138091076 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
138091076 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csum03021
]
138091076 (XRN2)
03019 Messenger RNA biogenesis [BR:
csum03019
]
138091076 (XRN2)
03009 Ribosome biogenesis [BR:
csum03009
]
138091076 (XRN2)
03016 Transfer RNA biogenesis [BR:
csum03016
]
138091076 (XRN2)
Transcription machinery [BR:
csum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138091076 (XRN2)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
138091076 (XRN2)
Ribosome biogenesis [BR:
csum03009
]
Eukaryotic type
Pre-60S particles
RNases
138091076 (XRN2)
Transfer RNA biogenesis [BR:
csum03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
138091076 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
138091076
NCBI-ProteinID:
XP_068842841
LinkDB
All DBs
Position
15:43673155..43739758
Genome browser
AA seq
951 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAIEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLSILREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPSFSPGGILTPHALGSRSSPGSQVASNPRQAAYEMRMQNNLSPSVSPNTSF
TSDGSPSPRGGIKRKVEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYKTGSTESVDVPPELCHGIQG
KFSLDEEAVLPDQVVCSPIPVLKDLTHNAVISINFKDPQFAEDYIFKAVMLPGARKPAPV
LKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDPAAFRALGHVMPRGSSGTGVYSNAAPPPP
TFQGNMYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQT
QNAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggctttcttccgctggctcagccgcaagtacccgtccatcattgtcaac
tgcgtggaagagaagccaaaagaatgcaatggtgtaaagattcctgtcgatgccagtaag
cctaaccccaatgatgtggagtttgataatctgtatttggatatgaatggaatcatccac
ccctgtacgcatcctgaagacaaaccagcaccaaaaaacgaggatgaaatgatggttgcg
atctttgagtacattgacagactcttcagtattgtcagaccaagacggcttctctacatg
gcaatagatggagtggcaccgcgcgctaaaatgaaccagcagcgttcaaggaggttccga
gcatccaaagaaggcatggaagcagcgatagagaagcagcgagtcagggaagagattctg
gcgaaaggtggctatcttcctccagaagaaataaaagaaagatttgacagcaactgtatt
acaccaggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccctgggtggaaaaatttgacagttattttatctgatgctagtgct
cctggtgaaggggaacataaaatcatggattatattagaagacaaagagcccagcctaac
catgacccaaacactcatcactgcttatgtggagcagatgctgatctcattatgcttggc
cttgctacacatgagcccaactttaccattatcagagaagaattcaaaccaaacaaaccc
aaaccctgtggtctttgtaatcaatttggacatgatgtcaaggactgtgaaggtttgcca
agagaaaagaagggaaagcacgatgaactggcagacagccttccttgtgcagaaggagag
tttatcttccttcgtctcagcattctccgtgagtatttggaaagagagctcaccatggcc
agcctgccgttcacgtttgatgtcgagaggagcatcgacgactgggtcttcatgtgcttc
tttgtgggaaacgacttccttcctcacctgccatccttagagattagggaaggtgccatt
gaccgcttggttaacatatacaaaaatgtggtacacaaaaccgggggttaccttacagaa
agtggttatgtcaatctgcagagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccatctttctctcctggtggaatattaacccct
catgcccttggttcaagaagctcaccaggatctcaagtggccagtaatccaagacaagca
gcttatgaaatgaggatgcagaataatttgagtccttcagtctctcctaatacgagtttc
acttctgacggctccccatctccgagaggaggaattaaacgaaaagtggaggacagtgac
agtgaacctgagccagaggataacgtcaggttatgggaagctggttggaaacagcgatac
tacaagaacaaatttgatgttgatgcagcagatgaaaaattccgacgtaaagttgttcag
tcttacgttgaaggactctgctgggttctacgatattattaccagggctgtgcgtcctgg
aagtggtattacccattccattatgcaccattcgcttcagacttcgaagggattgcagac
atgccttctgattttgagaagggtaccaaaccgtttaaaccactggaacaacttatgggg
gtttttccagctgccagtggtaactttctacctccatcatggcggaagctcatgagtgat
ccagattccagtataattgacttctaccctgaagattttgctattgatttgaatgggaag
aagtatgcatggcaaggtgtggctctgttgccgtttgtggacgagcggagattgcgtgct
gccctggaagaggtgtacccggacctcacccctgaagagaccagaagaaacagtcttgga
ggtgacgtcttatttgttgggaaacatcacccactgcacgacttcattttagagctgtac
aagacaggttccacagagtcagtggatgtaccacctgagctatgtcatgggatccaaggg
aagttttctttggatgaggaagctgttcttccagatcaagtagtatgttcccctattcca
gtgttaaaggatctgacacacaacgctgtgatcagtatcaattttaaggacccacagttt
gctgaagattacatttttaaagctgtcatgcttccgggagcaagaaaacctgcaccagtc
ctgaaacctagcgactgggagaaatccagcaacggacggcagtggaagccccagctcggc
tttaaccgggaccggcggcctgtccacctggatcccgcagcctttagggctttgggccat
gttatgccgagaggctcctccggaactggcgtctacagcaatgctgcaccaccaccccca
actttccaggggaacatgtaccggccacttctgcgaggacaagcccagattccaaagctc
atgtcaaatatgaggccccaggactcctggcgaggtccccctcccctttttcagcagcaa
agatttgacagaggtgttggggctgaacctctgctaccgtggaaccggatgctccaaacc
caaaatgcagccttccagccaaaccagtaccagatgctagctgggccgggcgggtatcca
cccagacgtgatgatcgtggagggagacagggatatcccagagaaggaaggaaataccct
ttgccaccaccctcaggaagatacagttggaattag
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