Capricornis sumatraensis (Sumatran serow): 138091913
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Entry
138091913 CDS
T10522
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum01524
Platinum drug resistance
csum03430
Mismatch repair
csum05200
Pathways in cancer
csum05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
138091913 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
138091913 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
138091913 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
138091913 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csum03400
]
138091913 (MSH2)
DNA repair and recombination proteins [BR:
csum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
138091913 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
138091913
NCBI-ProteinID:
XP_068844028
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All DBs
Position
1:complement(76749296..76831390)
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AA seq
934 aa
AA seq
DB search
MAVQPKDTLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHQEDALLAAREVFKT
QGVVKYMGPTGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDATQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVIPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQALLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTFNDVLA
QLDAVVSFAHVSNAAPVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGKPQECDEMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EESITRKLKQLKAEVIAKNNSFVNEIISRIKVTA
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggacacgctgcagctggagagcgcggccgaggtcggctttgtg
cgcttcttccaaggcatgccggagaagccgaccaccacagtgcgcctttttgaccgaggt
gacttctacaccgcgcaccaggaggacgctctgctggccgcccgcgaagtgttcaagacc
cagggggtggtcaagtatatggggccgacaggagcaaagactctggagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctagttcgtcagtacagagtt
gaagtttataagaacagagctggaaataaggcctccaaggagaatgattggtatttggca
tttaaggcctctccaggtaatctttctcagtttgaagatattctctttggtaacaacgat
atgtctgcttccattggtgttgtgggcgttaaaatgtctacagttgatggtcaaagacag
gtcggagttgggtatgttgacgccacacagaggaagctgggactgtgtgagttccccgat
aacgatcagttctccaatctggaggctctcctgattcagattggaccaaaggagtgtgtt
ataccaggaggggagactgctggagacatggggaaactgaggcaggttattcagagagga
ggaattttgattacagaaagaaaaagagctgacttttccacgaaagatatttatcaggac
ctcaaccggttgttgaaaggcaagaagggagaacagatgaatagtgctgtcttgccagaa
atggagaaccaggttgcagtttcttccttgtctgcagtaatcaaatttttagaactctta
tcagatgactcaaactttggacagtttgaactgactacttttgacttcagccagtacatg
aaattggatattgcagcagtgagagcccttaaccttttccagggttctgttgaagatact
tctggctctcagtctctggccgcattgctgaataaatgcaaaacccctcaaggacaaagg
ctggttaaccagtggattaagcagcctcttatggacaagaacagaatagaagagagatta
aatttggtagaagcttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgatttccagatcttaaccgacttgccaagaaatttcaaagacaagcggcaaat
ttacaagattgttaccgactctatcagggtataaatcaactccctaatgttattcaggct
ttggaaaaatatgaaggaaaacatcaggcattgttgctggcagtttttgtgactcctctt
attgatcttcgttctgacttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaacttgagtgaa
ttaagagaaataatggatgacttagaaaagaagatgcagtcaacattagtaagtgcagct
agagatctaggcttagatcctggcaaacagattaaactggattccagcacacagtttggc
tattatttccgagtaacgtgcaaggaagaaaaagtccttcgtaataataaaaatttcagt
acagtagatatccagaagaatggtgttaaatttacgaacagtaaactgacttctctcaat
gaagagtataccaaaaataaaactgaatatgaggaagcccagaatgccattgtgaaagaa
attgtcaatatttcttcaggctatgtagaaccaatgcagacattcaacgacgtgttagct
cagctggatgctgttgtcagctttgctcatgtgtccaatgcagcacctgttccatatgta
cggccagtcattttggaaaaaggacgagggagaattacactgaaagcatccagacatgct
tgtgtggaagttcaagatgaagtcgcatttattcctaatgatgttcactttgaaaaagat
aaacaaatgttccacatcattactggtcccaacatgggagggaaatcgacatatattcgc
cagactggggtggtagttctcatggcccagattgggtgttttgtgccatgtgagtgggca
gaagtgtccattgtggactgcatcttggcccgggtaggggctggtgacagtcagttgaaa
ggagtctccacgtttatggctgaaatgttagaaactgcttctattctcaggtctgcaacc
aaagattccttaataatcatagatgaattgggaagaggaacctctacctatgatggattt
ggattagcgtgggctatatcagagtacattgcaacgaagatcggtgctttttgcatgttt
gcaacccattttcatgaacttacagccttggccaatcaaatacctactgttaataatctg
catgtcacagcactaactactgaagagactttaactatgctttatcaggtgaagaaaggt
gtctgtgatcaaagttttgggattcatgttgctgagcttgctaatttcccccggcatgta
atagagtgtgccaaacagaaagccctggagttggaggagtttcagaatattgggaaacca
caggaatgtgatgaaatggaaccagcagcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaagaatttctgtccaaggtaaagcaagtgccctttactgaaatgtca
gaagaaagcatcacaagaaagttaaaacagctaaaagctgaggtgatcgcaaagaataat
agttttgtaaatgaaatcatttcccgaataaaggtaactgcgtga
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