Capricornis sumatraensis (Sumatran serow): 138092441
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Entry
138092441 CDS
T10522
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csum04131
]
138092441 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csum04147
]
138092441 (COPB1)
Membrane trafficking [BR:
csum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
138092441 (COPB1)
Exosome [BR:
csum04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
138092441 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Img2
Motif
Other DBs
NCBI-GeneID:
138092441
NCBI-ProteinID:
XP_068844445
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All DBs
Position
16:40140591..40173840
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AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYSSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEERP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNIVDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIQQGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKNSI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgccgagaacgtatgctatacgttaattaacgtgccaatggattcagaacca
ccgtctgaaattagcttaaaaaatgatctagaaaaaggagatgtgaagtcaaagactgaa
gctttgaagaaagtaatcattatgattctgaatggtgaaaaacttcctggacttctgatg
accatcattcgctttgtactgcctcttcaggatcataccatcaaaaaattacttctggta
ttttgggaaattgttcctaaaacaactccagatgggaggcttttacatgaaatgatcctt
gtttgtgatgcatataggaaggatcttcagcatcctaatgaatttattcgaggatctact
cttcgttttctttgcaagttgaaagaggcagaattgctggaacctttaatgccagctatc
cgtgcttgtttggagcatcgacacagctatgttagaagaaatgctgttttggccatctat
actatctatagaaactttgaacatcttataccggatgctcctgaattgatacatgatttt
ctggtgaatgagaaggatgcaagttgcaaaagaaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattacctaagtacttgtattgatcaagttcagacatttgga
gacattcttcagttggttatcgttgaactaatttataaggtctgtcatgctaatccatca
gaaagggctcgtttcattcgctgcatctataacttactacagtcatctagccctgctgta
aaatacgaagctgctggaacattagtaaccctctctagtgcacccactgccatcaaggct
gctgctcagtgttacattgatttaattattaaggagagtgacaacaatgtaaagcttata
gttctggatcgattgatagagttaaaagaacatcctgctcatgaacgagtactacaggat
ctggttatggacatcctaagagtattgagcacaccagacttagaagtacgcaagaagact
ctgcagttagcactggatcttgtctcctctaggaatgttgaagagctggttattgtcctt
aagaaggaagtaattaaaacaaataatgtgtcagagcatgaagatactgacaaatacaga
caactacttgtgcgaacattgcattcctgttctgtccgatttccagatatggctgcaaat
gttattcctgtgttaatggaatttctcagtgacagtaatgaagcagcagctgcagatgtc
ttggagtttgttcgtgaagccattcagcgctttgataacctgagaatgcttattgttgag
aagatgcttgaagtctttcatgctatcaaatctgtcaagatttaccgaggagcattgtgg
atcttgggagaatactctagtaccaaggaagacattcagagtgtgatgactgaggtccga
aggtcccttggggagatcccaattgtagagtcagagattaaaaaagaagctggtgaattg
aaacctgaagaagaaataactgtgggaccagttcagaagttggtaactgagatgggcacc
tatgcaactcagagtgcccttagcagttctagaccaaccaagaaagaggaagaaagacct
cccctaagaggattccttctggatggagatttctttgttgctgcctcccttgccacaact
ctgaccaagattgccttgcgctatgtggctttggttcaggagaagaaaaagcaaaattct
tttgttgctgaagcaatgttgctcatggccactatcctacatttgggaaaatcctctctt
cctaagaagccgattacagacgatgatgtagatcgaatctccttgtgcctcaaggtctta
tctgaatgttcacctttaatgaatgacattttcaataaggaatgcagacagtccctttct
cacatgttatctgctaaacttgaagaagaaaaattatcccaaaagaaagaatctgaaaaa
aggaatgtgacagtacagcctgatgaccccatttccttcatgcaactaactgcaaagaat
gaaatgaactgcaaggaagatcagtttcagctgagtttgctggcagcaatgggtaacaca
cagagaaaagaagccgcagatcccctagcatctaaacttaacaaggttacccaattgaca
ggtttctcagaccctgtgtacgcagaagcctatgttcatgtcaaccagtatgatatcgtc
ctggatgtacttgttgtgaaccaaaccagtgacaccttgcagaactgcacgttagagtta
gctactctgggggacttgaaacttgtggaaaagccatctcctttgactcttgctcctcat
gattttgcaaatattaaagctaatgtcaaagtagcatcaacagaaaatggaataattttt
ggtaatatagtttatgatgtctctggagcagcaagtgacagaaattgtgtggtcctcagt
gatattcacattgacatcatggactatatccagcctgcaacttgcactgatgccgaattc
cgtcagatgtgggctgaatttgaatgggaaaacaaagtgacggttaacacaaacatagtt
gatttaaacgactatttacagcacatattaaagtcaaccaacatgaaatgcctcactcca
gagaaggcactttctggttactgtggctttatggcagccaacctctatgctcgttccata
tttggagaagatgcacttgcaaatgttagcattgagaagccaatacaacagggaccagag
gcccctgttactggccacataagaatccgtgcaaagagtcagggaatggccttaagtctt
ggagataaaatcaacttgtctcagaagaaaaatagtatataa
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