Capricornis sumatraensis (Sumatran serow): 138092471
Help
Entry
138092471 CDS
T10522
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csum03021
]
138092471 (CTR9)
Transcription machinery [BR:
csum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
138092471 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
138092471
NCBI-ProteinID:
XP_068844506
LinkDB
All DBs
Position
16:complement(43784537..43808768)
Genome browser
AA seq
1173 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGGGGRRSKKGGEFDEFVNDDTDEDLPVSKKKKRRKGSGSEQEGEEEEGGERKKKKR
RRPPKGDEGSDDDETENGPKPKKRRPPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADEGHPRNSHSNSDSDEGEPRKKGASSESDSEENQNKSGSEAGSPRRSRRSH
SDEDSDSDQPARKRRPSGSEQSDNESLRSGRSRSAGSEMDSRPASPSAESDHDSERASDN
EGSGPGSGNESEPEVSNNEASDRGSERGSDDSD
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctctattgagattccccttcgggacactgacgaggtcattgaacttgat
tttgatcagttaccggagggagatgaagttatcagtattctgaaacaggaacacacacaa
ctgcacatatggattgctttggcgctggaatactacaagcaagggaaaacagaagagttt
gtcaagttgttggaagcagcgcgtatagatggcaatttggattatagagaccatgaaaaa
gaccagatgacttgcttggatacattggcagcctattatgttcaacaggctcgtaaggaa
aagaataaggacaacaagaaggatcttattacacaggcaaccctattgtatacaatggca
gataaaattattatgtatgatcagaaccatttgttaggaagagcctgcttctgccttctt
gaaggtgacaaaatggatcaagctgatgcacagtttcattttgtacttaaccagtctcca
aataatattccagcactgcttggtaaagcttgcatttcgttcaacaagaaggattacaga
ggcgctctagcttactataagaaagccttgcggactaacccaggttgtccagcggaggtt
cgtttaggaatgggccattgctttgtgaaacttaacaaattggagaaagctcgtctggca
ttcagcagagccctggaactcaattccaagtgtgtgggcgcattggtgggactggctgtt
ctagaactcaataataaagaggctgattccatcaaaaatggtgtccagcttctttccaga
gcctatactattgatcctagcaaccctatggtattaaaccacttagcaaatcactttttc
ttcaaaaaggattacagtaaagtccagcacttggctctccatgcattccataatacagaa
gtggaggccatgcaagcagaaagttgctatcagttggctagatcattccatgtccaggaa
gattatgaccaagctttccaatactactatcaagccacacagtttgcctcatcctctttt
gtgctgcctttttttggtttgggacaaatgtacatttatcgaggtgacaaagagaatgca
tctcagtgctttgagaaagttttgaaagcttatcctaataattatgaaactatgaaaatt
cttggctctttatatgctgcttcagaagaccaagaaaaaagagatattgccaagggccat
ttgaagaaggtcacagaacagtatcctgatgatgttgaagcttggattgagttggcacag
atcttagaacagactgatatacagggtgccctgtcagcctatggaacagcaacacgcatc
cttcaggagaaagtgcaggccgatgtccccccagagattctgaataacgtgggtgccctt
cacttcagacttggaaatctgggtgaggcaaagaaatactttttggcatctttggatcgt
gcaaaggccgaagctgagcatgatgaacattattataacgccatttctgttacaacgtca
tacaatttagccaggctgtatgaggcgatgtgtgaattccatgaagctgaaaaactatat
aaaaacatcttacgggaacatcctaattatgttgactgctatctgcgcctaggagcaatg
gctagagataaaggaaacttttatgaggcttcagattggtttaaggaagctcttcagatt
aatcaggaccatccagatgcttggtctttgattggtaatcttcatttagcaaaacaagaa
tggggtccaggccagaagaaatttgagaggatattaaaacaaccagctactcagagtgac
acttattctatgctggcccttggcaacgtctggcttcaaactttgcatcagcccacccga
gatagagaaaaggaaaagcgtcatcaggatcgtgctctggctatctacaaacaagtactc
agaaatgatgcaaagaatctatacgctgctaatggcataggagctgtcttggcccacaaa
ggatatttccgtgaagctcgtgatgtatttgcccaagtaagagaagcaacagcagatatc
agtgatgtgtggttgaatctagcacacatctacgtggaacaaaagcaatatatcagtgct
gttcagatgtatgaaaactgcctcagaaagttttataagcaccagaacacagaagttgtg
ctgtatttggcccgggccctcttcaaatgtggcaagttacaggaatgcaaacaaaccctg
ctgaaggctagacacgtggcacccagtgatacagttcttatgtttaatgtggccttggtc
ctacaaagattagctacctctgtcctgaaagatgaaaagagtaatctgaaggaagtactt
aatgctgtgaaggaactggagcttgcacacagatatttcagttacttgagtaaagtggga
gataaaatgagatttgacttggcccttgctgctacagaagccaggcaatgctctgactta
ctgagccaggcgcaataccacgtggcccgggcacgcaagcaagatgaagaagaaagggag
ttgcgggccaaacaagaacaagagaaagaactgctaaggcagaaacttctcaaagaacag
gaagagaaacgtctcagagaaaaagaagagcaaaagaaacttttggaacagcgggcccag
tatgtagaaaagaccaaaaatattcttatgtttactggagagactgaagcaacaaaagaa
aagaaaagaggtggtggtggtggacggcgttccaagaagggaggagagttcgatgaattt
gtcaatgatgacaccgatgaggacctgcctgtctccaaaaagaagaagcgaaggaagggc
agtggtagtgagcaagaaggcgaggaagaggagggcggcgagagaaagaagaagaagagg
agaagacctccgaagggagatgaaggatctgatgatgatgaaacagaaaatggccccaaa
ccgaaaaagcgccgtcccccgagagcagagaagaagaaggctcccaagccagaacgtctg
cctccttcaatgaagggaaaaataaaatccaaagccataatatcatcaagtgatgattcg
tctgatgaagataaactgaaaattgctgatgaagggcatccccgcaacagccacagcaac
agcgactcagatgagggcgagccgcggaagaagggtgcctcctcggagagcgactcggag
gagaaccagaacaagtccggcagcgaggccggcagcccccggcggtcccggagatcccac
tccgatgaggattcagacagcgaccagccggccaggaaacgcaggccctcaggctccgaa
cagtcagacaacgagtccctacggtcagggcggagccgctccgcaggctctgagatggac
tcccggcccgcgtcccccagtgccgagtcggaccacgactcagaaagagcatctgacaat
gagggctccggcccaggttccggaaatgaatctgaacccgaggtatccaacaatgaggcc
tcggataggggctcagaacgtggttcagatgatagcgactag
DBGET
integrated database retrieval system
