Capricornis sumatraensis (Sumatran serow): 138092537
Help
Entry
138092537 CDS
T10522
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04140
Autophagy - animal
csum04148
Efferocytosis
csum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138092537 (VPS11)
04148 Efferocytosis
138092537 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138092537 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csum04131
]
138092537 (VPS11)
Membrane trafficking [BR:
csum04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138092537 (VPS11)
Hops complex
138092537 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
Beta-prop_WDR3_1st
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
Beta-prop_WDR36-Utp21_1st
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
DUF1993
DUF5847
zf_RING_Vps8_fungal
zf-RING-like
DLP_helical
Motif
Other DBs
NCBI-GeneID:
138092537
NCBI-ProteinID:
XP_068844642
LinkDB
All DBs
Position
16:31546803..31557287
Genome browser
AA seq
941 aa
AA seq
DB search
MATYLQWRRFVFFDKELVKEPQGNDGAAPGAAPASGPAASKFLCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ
ILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLITHWFRGYLVIVSRDRKVSPKSEFTS
RDSQSSDKQILNIYDLCNKFIAYSAVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSES
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ
AESNMKRYGKILMHHIPEQTTQLLKGLCTDYRPSLEGRGDREAPGCRANSEEFIPIFANN
PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEEDPQVKEKLHAEAISLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVVAVCERHGEQEPSLW
EQALSYFARKEEDCKEYVAAVLKHIESKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQ
KQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGVFNKLTLLTDPPTARLTASPEAGLQRDLLMHARRGT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctacctgcagtggcggcgcttcgttttcttcgacaaggagctggtgaaggag
ccacagggcaatgatggggctgctcccggggccgcgcctgcttctggacccgctgcttcc
aagttcctttgcctccctcctggcatcacagtctgcgactcaggccgagggagcctagtc
tttggagatatggaaggccagatctggttcttgccccgctccctacagcttacgggtttc
caagcctacaaactacgggtgacacacctgtaccaactgaagcagcacaatattctggcc
tctgttggtgaggatgaagagggcatcaaccccctggtaaagatctggaacctggagaag
agagatggtggcaatccactctgcactcgaatcttccctgccatcccggggacagaaccg
actgttgtatcttgtttgactgtccatgaaaatctcaactttatggccattggtttcaca
gatggcagtgttacattgaacaaaggcgacatcactcgggaccgacatagcaagacccag
attttgcacaagggcaactatcctgttactggactggcctttcgccaagcgggaaagacc
actcacttgtttgttgtgacaactgagaatgttcagtcctacatagtttctggaaaggac
tatcctcgtgtggaattggacacccatggttgtggcctgcgctgctcagccctcagcgac
ccttctcaggacctgcagttcatagtggcaggggatgaatgtgtctatctgtaccagcct
gatgaacgtgggccctgctttgcctttgagggccataaactcatcactcactggtttaga
ggctatcttgtcattgtctcccgtgaccggaaggtttctcccaagtcagagtttaccagc
cgggactcccagagctctgacaaacagattctcaacatctatgacctgtgcaacaagttc
atagcctatagcgccgtctttgaagatgtagtggatgtgcttgctgagtggggctccctg
tacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggacacacagaccaaa
ctggagatgctgtttaagaagaacctatttgagatggcaattaacctggccaagagccag
catctggacagcgatgggttggctcagatcttcatgcagtatggggaccacctctacagc
aagggcaaccatgatggtgctgtccagcagtatatccgaaccattggaaagttggagcca
tcgtacgtgatccgcaagttcctcgatgcccagcgcatccataacctgacagcctacctg
cagaccctgcaccggcagtccttggccaatgccgaccacaccaccctgctgctcaactgc
tacaccaagctcaaggacagctcgaagctggaggagttcatcaagacaaagagtgagagt
gaagtccactttgatgtggagacagccatcaaggtcctccggcaggctggctactattct
catgccctctatttggctgagaaccatgctcatcatgagtggtacttgaagatccagcta
gaggacatcaagaattatcaggaagccctccggtatatcggcaagctgccttttgagcag
gctgagagcaacatgaaacgctatggcaagatcctcatgcaccatataccagagcagaca
acccagctgctgaagggactctgtaccgactatcggcctagccttgaaggccgaggtgat
agggaggctccaggctgcagggccaactcagaggagttcatccccatctttgccaacaac
cctcgagagctgaaagcgttcctagagcacatgagcgaggtgcagcctgactccccgcag
ggcatctacgacacactgcttgagctgcgactccagaactgggcccacgaggaggatcca
caggtcaaagagaagcttcacgcagaggccatctccctactgaagagtggccgcttctgt
gatgtctttgacaaggccctggtcctctgccagatgcacgacttccaggatggagtcctt
tacctctatgagcagggcaaactgttccagcagatcatgcactaccacatgcagcacgag
cagtaccggcaggtggtcgccgtgtgtgagcgccacggggagcaggagccctccctgtgg
gagcaggcgctcagctacttcgcccgcaaggaggaggactgcaaggagtacgtggcggct
gtgctcaagcacatcgagagcaagaacctcatgccgccccttctagtggtacagaccctg
gcccataactccacggccactctgtctgtcatccgggactacctggtccaaaaactgcag
aaacagagccagcagatcgcccaggacgagctccgggtgcggcgctaccgagaggagact
acgcgcatccgccaggagatccaggagctgaaggcaagtccaaagattttccagaagacc
aagtgcagcatctgtaacagtgccttggagctgccctcagtccactttctctgcggccac
tccttccaccaacactgctttgagagttactcggaaagtgacgctgactgccccacctgc
ctccctgaaaaccgcaaggtcatggatatgatccgggcccaggaacagaagcgagatctc
cacgatcagtttcagcaccagctcaagtgctccaacgacagcttctctgtgattgctgac
tactttggccgaggtgttttcaacaaattgactctgctgaccgacccgcccacagcccga
ctgactgcaagcccggaggctgggctgcagcgggacttgctcatgcatgccaggaggggc
acttaa
DBGET
integrated database retrieval system
