Capricornis sumatraensis (Sumatran serow): 138092719
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Entry
138092719 CDS
T10522
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138092719 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138092719 (CLP1)
Enzymes [BR:
csum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
138092719 (CLP1)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
138092719 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
ATP_bind_1
TniB
MMR_HSR1
AAA_22
AAA_16
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
138092719
NCBI-ProteinID:
XP_068844884
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All DBs
Position
16:80985224..80988237
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AA seq
425 aa
AA seq
DB search
MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGAEESLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggaggccaatgatgacaagaagccaacaactaaatttgaactggagcgggag
acagagcttcgctttgaggtggaggcgtcgcagtcagttcagttggagctgctggctggc
atggcagaaatcttcggcacagagctgacccgaaacaagaagttcacctttgatgctggc
gccaaggtggctgtcttcacttggcacggctgttcgctgcagctcagtgggcgcaccgag
gtggcttacgtttccaaggacaccccaatgttgctttatctcaacacacatacggccttg
gagcagatgcggaggcaggccgagaaggaggaggagcggggcccccgggtgatggtcgtg
ggccccacggacgtgggcaagtccaccgtgtgccgtctgctgctcaactacgcggtgcgt
ctgggccgccgtcccacgtacgtggagctggatgtgggccagggctctgtgtccatcccc
ggcacgatgggggccctctacatcgagcggccggcggacgttgaggaggggttctccatc
caggccccgctggtgtaccacttcggctccaccacgcctggcaccaacatcaagctttat
aataagattacatctcgtttagccgatgtgttcaaccaaaggtgtgaagtgaaccgcagg
gcctcggtgagcggctgtgtcattaacacctgtggctgggtcaagggctctggttaccag
gccctggtccacgcagcctcagcctttgaggtggatgtcgtcgtggttctggatcaagaa
cggctgtacaacgagctgaagcgggacctgcctcactttgtccgcacggtgctgctcccc
aagtcggggggtgtggtggagcgctccaaggacttccggcgggaatgccgggatgagcgc
atccgtgagtatttctatgggttccggggctgtttttatccccatgccttcaacgtcaaa
ttttcagatgtgaaaatctacaaagtcggggcacccaccatcccagactcctgcctgcct
ctgggcatgtctcaggaggacaatcagctcaagctggtgcccgtcacccccggccgagat
atggtacaccacctgctgagcgtcagcaccgccgagggcgcggaggagagcctctcggag
accagcgtggcgggcttcattgtggtgaccagcgtggacctggagcaccaggtgttcacc
gtcctctcccccgccccccgcccgctgcccaagaacttcctactcatcatggatatccgg
ttcatggatcttaagtag
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