Capricornis sumatraensis (Sumatran serow): 138093009
Help
Entry
138093009 CDS
T10522
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04145
Phagosome
csum04148
Efferocytosis
csum04151
PI3K-Akt signaling pathway
csum04510
Focal adhesion
csum04512
ECM-receptor interaction
csum04518
Integrin signaling
csum04810
Regulation of actin cytoskeleton
csum04820
Cytoskeleton in muscle cells
csum05165
Human papillomavirus infection
csum05205
Proteoglycans in cancer
csum05410
Hypertrophic cardiomyopathy
csum05412
Arrhythmogenic right ventricular cardiomyopathy
csum05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
138093009 (ITGB5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138093009 (ITGB5)
04518 Integrin signaling
138093009 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
138093009 (ITGB5)
04148 Efferocytosis
138093009 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
138093009 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138093009 (ITGB5)
04810 Regulation of actin cytoskeleton
138093009 (ITGB5)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
138093009 (ITGB5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
138093009 (ITGB5)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
138093009 (ITGB5)
05412 Arrhythmogenic right ventricular cardiomyopathy
138093009 (ITGB5)
05414 Dilated cardiomyopathy
138093009 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csum04131
]
138093009 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csum04515
]
138093009 (ITGB5)
Membrane trafficking [BR:
csum04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
138093009 (ITGB5)
Cell adhesion molecules [BR:
csum04515
]
Integrins
Integrin beta subunits
138093009 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
EGF_2
I-EGF_1
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
DUF4232
Motif
Other DBs
NCBI-GeneID:
138093009
NCBI-ProteinID:
XP_068845199
LinkDB
All DBs
Position
1:complement(175609885..175722241)
Genome browser
AA seq
800 aa
AA seq
DB search
MPRAPALLFSCLLGLCALVPRLPGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSLRSV
TSRCDLKANLIRNGCGGEFESPASSTQVLRSLPLSSKGSSPAGSDVIQLTPQEVTVTLRP
GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLENIRSLGTKLAEEMRKLTSNFRLGFG
SFVDKNISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
HGDSKNILQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
TASFEVSVEARSCPGKHAQHTFTLRPVGFRDSLEVGVTYNCSCGCSAGLEPDSARCSSNG
TYVCGLCECNPGYLGTRCECQEGESQSGYQNLCREAEGKPLCSGRGQCSCSQCSCFESEF
GKIYGPFCECDDFSCARNRGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCQARDGH
ICSDRGHCVCGQCQCTEPGAFGETCEKCPTCPDACSTKRDCVECLLLHSGSSADNQTCQN
LCKDEVITRVDTIVKDDQEAVLCFYKTAKDCVMMFTYSELPSGKSNLTVLREPECGTAPS
AMTILLAVVGSILLTGFALLVIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIS
THTVDFTFNKFNKSYNGTVD
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggcccccgcgctcctgttctcctgcctcctcgggctttgcgcgctcgtgccc
cggctcccaggtctcaacatatgcactagtggaagtgccacctcatgtgaagaatgcctg
ctaatccacccaaaatgtgcctggtgctccaaagaggacttcgggagcctgcggtcggtc
acttcccggtgcgacttgaaggcgaacctgatcaggaatggctgtggcggcgagttcgag
agcccggccagcagcacccaggttctgcggagcctgccgctcagcagcaagggctccagc
ccagcggggtccgatgtcatccagctgacaccgcaggaggtcacggtgaccctgaggccc
ggtgacaagactacgttccagctgcaggttcgacaggtggaggattatcccgtggacttg
tactacctgatggacctctctctgtccatgaaggatgacctggaaaacatccggagcctg
ggcactaagctagctgaggagatgaggaagctcaccagcaacttccggttggggtttggg
tcttttgtagacaagaacatctctcctttctcctacacagcgccgaggtaccagaccaac
ccatgcattggttacaagctgttcccaaactgtgtcccctcctttgggttccgccacctg
ctgcctctcacggacagagtggacagcttcaacgaggaagttcggaagcagagggtgtcc
cggaaccgcgatgccccggagggtggctttgacgcagtgctccaggcggccgtctgcaag
gagaagatcggctggcgaaaggacgcgctgcacttgctggtgttcaccacggacgacgtg
ccccacatcgcgctggacggaaagctggggggcctggtgcagccgcatgacggccagtgt
cacctgaacgaggccaacgagtacacagcatccaaccagatggactatccatcccttgcc
ttgctcggagagaaattggcagagaacaacatcaacctcatctttgcagtgacgaaaaac
cactatatgctctataagaattttacagccctgatacctggaacaacagtggagatttta
cacggagactccaaaaatattcttcagctgattatcaatgcatataatagcatccggtct
aaagtggagctgtctgtctgggatcagcctgaggatcttaatctcttcttcactgctacc
tgccaggacggtgtatcctaccctggtcagaggaagtgcgagggcctgaagatcggggac
acggcgtcctttgaggtgtcggtggaggcccggagctgccccggcaaacacgcgcagcac
acgttcaccctgcggcctgtgggcttccgggacagcctggaggtgggggtcacctacaac
tgcagttgcggctgcagcgcggggctggagcccgacagcgccaggtgcagcagcaacggg
acttacgtctgcggcctgtgcgagtgcaaccccggctacctgggcacccggtgcgagtgc
caggaaggggagagccagagcgggtaccagaacctgtgccgggaggcggagggcaagcct
ctgtgcagcgggcgtggccagtgcagctgcagccagtgctcctgcttcgagagcgagttt
ggcaagatctacgggcccttctgcgagtgtgacgacttctcctgcgccaggaacagaggt
gtcctctgctcaggccacggcgagtgtcactgcggagaatgcaagtgccacgcaggttac
atcggggacaactgtaactgctcgacagacatcagcacatgccaggccagggatggccac
atctgcagcgaccgtgggcattgtgtctgcgggcagtgccagtgcacagagccaggcgcc
tttggggagacgtgtgagaagtgcccaacctgccccgatgcctgcagcaccaagagagac
tgtgtcgagtgcttgctgcttcactcagggagctcagctgacaaccagacctgccaaaac
ctgtgcaaggatgaggtgatcacacgggtggacaccattgtgaaagatgaccaggaggct
gtgctttgtttctacaaaaccgccaaggattgtgtgatgatgttcacctactcagagctc
cccagtgggaagtccaacctcacggtcctcagggagccagagtgtgggaccgctcccagc
gccatgaccatcctcctggctgtggtcggcagcatcctcctgactgggtttgcgcttctg
gtcatctggaagctgctcgtcaccattcacgaccggagagagttcgccaagttccagagt
gagcgatccagggcccgctacgaaatggcttcaaaccctctgtacagaaagcccatctcc
acacacactgtggatttcactttcaacaagttcaacaaatcatacaatggcacagtggac
tga
DBGET
integrated database retrieval system
