Capricornis sumatraensis (Sumatran serow): 138093435
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Entry
138093435 CDS
T10522
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03030
DNA replication
csum03410
Base excision repair
csum03420
Nucleotide excision repair
csum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138093435 (RFC5)
03410 Base excision repair
138093435 (RFC5)
03420 Nucleotide excision repair
138093435 (RFC5)
03430 Mismatch repair
138093435 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csum03032
]
138093435 (RFC5)
03036 Chromosome and associated proteins [BR:
csum03036
]
138093435 (RFC5)
03400 DNA repair and recombination proteins [BR:
csum03400
]
138093435 (RFC5)
DNA replication proteins [BR:
csum03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
138093435 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
138093435 (RFC5)
Chromosome and associated proteins [BR:
csum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
138093435 (RFC5)
DNA repair and recombination proteins [BR:
csum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
138093435 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
138093435 (RFC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_11
AAA_22
AAA_assoc_2
AAA_16
RuvB_N
AAA_lid_RFC1
DUF815
AAA_14
DEAD
nSTAND_NTPase5
ResIII
AAA_5
ATPase_2
AAA_19
nSTAND3
TniB
PhoH
AAA_30
TIP49
AAA_7
DNAX_ATPase_lid
Thioredoxin_6
IstB_IS21
bpMoxR
NPHP3_N
ABC_tran
AAA_3
AAA_28
Motif
Other DBs
NCBI-GeneID:
138093435
NCBI-ProteinID:
XP_068845537
LinkDB
All DBs
Position
17:complement(63996181..64006555)
Genome browser
AA seq
339 aa
AA seq
DB search
METSAHKQQQPEAAKIRNLPWVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLLYGP
PGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKL
VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPEL
MVPRLEHVVEEEKVDISEDGMKALITLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGH
PLKSDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHL
LTKMADIEYRLSVGTSEKIQLSSLIAAFQVTRDLIVTEA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcagcgcacaagcagcagcagcctgaggcggccaagatcagaaacctgccc
tgggttgaaaaataccggccccagacactggatgatctcatttctcatcaggacatcttg
agtactattcagaagtttatcagtgaggaccgcctgccgcacctccttctgtatggtcct
ccagggacaggaaagacatccaccatcctggcctgtgctaaacagctgtacaaagataag
gaatttggctccatggtcttggagctgaatgcttcagatgaccgaggaatagatattgtt
cggggaccaatcttgagctttgctagcacaaggacaatatttaagaaaggctttaaacta
gtgatcctggatgaggccgatgccatgactcaggacgcccagaacgccctgcggagagtg
attgagaagtttactgaaaataccagattttgcctcatctgtaactatctgtcaaagatc
attcccgccttgcagtcccggtgtacaagattccgattcggaccactgactcccgaactc
atggttccccgcctggaacacgtcgtagaagaagagaaagttgatataagtgaagacggg
atgaaagcactcataactctttccagtggagacatgcgaagggctctgaacatcttacag
agcaccaacatggcctttgggaaggtcacagaggagaccgtctacacctgcacaggacac
ccactcaagtcagacatcgccaacattctggactggatgttgaatcaagacttcaccacg
gcctacaggaatatcatggagttaaaaacgctgaaggggttggcattacacgacatcctg
acggagatacacctgttcgtgcacagagttgactttccatcttcagttcgaatacattta
ttgaccaaaatggcagacattgagtacagactttctgttggcaccagtgagaagattcag
ctgagttccctcattgccgcttttcaagtcaccagagacctgattgtcactgaggcctag
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