Capricornis sumatraensis (Sumatran serow): 138093479
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Entry
138093479 CDS
T10522
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csum03009
]
138093479 (DDX55)
Enzymes [BR:
csum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138093479 (DDX55)
Ribosome biogenesis [BR:
csum03009
]
Eukaryotic type
Pre-60S particles
Helicases
138093479 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
Cas3-like_C_2
YbjM
Motif
Other DBs
NCBI-GeneID:
138093479
NCBI-ProteinID:
XP_068845608
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Position
17:complement(58888199..58905066)
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AA seq
601 aa
AA seq
DB search
MEHVTEGSWESLPVPLHPQVLSVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPIVEILLRREEKLKKSQVGAIIITPTRELAVQIEEVLSHFTKPFPQFSQILWIGG
RNPGEDVARFKELGGNIIVATPGRLEDMFRRKAEGLDLASYVRSLEVLVLDEADRLLDMG
FETSINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENHYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEALVKGVKIMCIH
GKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVHWVLQYDPPSNASAFVHRCGRTA
RIGHGGSALVFLLPMEESYISFLAINQKCPLQEMKLQKNTADLLPKLKAMALADRAVFEK
GMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVN
PDTIPFKDKIREKQRQKQLLEQQRKEKTENDGRRKFIKNKAWSKQKAKKEKKKKLNEKRK
REEGSDMEDEDMEELLNDTRLLKKLKKGKITEEEFEKGLLTSGKRSTNKADLQISDVEDD
C
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggttcctgggagtcgctaccggtgccgctgcatccgcaggtg
ctgagtgtcttgcgggagctcggttttccgtacatgacgccggtgcagtctgcaaccatc
cctctgttcatgaaaaacaaagacgttgctgcagaagcggtcacaggtagtggcaaaacc
ctcgcttttgtcatccccatcgtggaaattctcctgaggagggaagagaagttaaagaag
agtcaggtgggcgccataatcatcacacccacgcgagagctggctgttcagatagaggag
gtcctgtctcatttcacgaagcctttcccacagtttagccagattctctggattggaggc
aggaatcctggagaagatgtcgccagatttaaggagcttggtgggaacatcatcgtggca
accccaggccgcctggaggacatgttccgaaggaaggctgagggcctcgatctggcgagc
tacgtgaggtccctggaggtcctggtattggatgaagcagacaggcttctggacatgggt
tttgagacaagcataaacaccatcctggagtttttgcccaagcagaggagaacgggcctt
ttctctgccactcagacccaggaggtggagaacctggtgagagctggcctgcggaacccc
gtgcgcatctcggtgaaggagaagggcgtggcggccagcagcacccagaagaccccttcc
cgcctggagaaccattacatggtctgtaaggcagatgagaaatttaatcagctggtacat
tttcttcgaaaccataagcaggagaaacatctggtcttcttcagcacctgcgcctgtgtg
gaatactacggaaaggctctggaggccctggtgaagggtgtgaagataatgtgcattcac
ggaaagatgaaatacaagcgcaataagatcttcatggagtttcgcaaattgcagagtggg
attttagtgtgcactgacgtgatggcccgaggaatagatattcctgaagtacactgggtc
ttgcagtatgatcctcccagtaatgccagtgccttcgtgcatcgctgtggccgcacggcc
cgcatcggtcatggcggcagcgcgctcgtgtttctgcttcccatggaagagtcgtatatc
agcttccttgcaattaaccaaaaatgccccctgcaggagatgaaactccagaagaacaca
gccgacctccttccaaagctcaaggccatggccctggccgacagagccgtgtttgagaag
ggcatgaaagcttttgtgtcatacgtccaggcttacgccaagcatgagtgcaacctcatc
ttcagattaaaggatcttgattttgctagtcttgctcgaggttttgccctgctgaggatg
cccaaaatgccagagctgagaggaaagcagtttccagatttcgtgcctgtggatgtcaac
ccagataccattccatttaaagacaaaatcagagaaaagcagaggcagaagcaattattg
gagcagcagagaaaagagaaaacagaaaatgacgggagaagaaaattcataaaaaataaa
gcttggtcaaagcagaaggccaaaaaggaaaagaagaaaaaactgaatgaaaaaaggaaa
agggaggagggttctgatatggaggatgaagacatggaggaacttctgaatgacacgagg
ctcttgaaaaagttaaagaaaggcaaaattactgaagaggaatttgagaaggggctgttg
acaagtggcaaaaggtcaacgaacaaagcagatttgcagatctcagatgtggaagatgac
tgctga
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