Capricornis sumatraensis (Sumatran serow): 138094071
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Entry
138094071 CDS
T10522
Symbol
PABPC4L
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03015
mRNA surveillance pathway
csum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138094071 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
138094071 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138094071 (PABPC4L)
03041 Spliceosome [BR:
csum03041
]
138094071 (PABPC4L)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138094071 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
138094071 (PABPC4L)
Spliceosome [BR:
csum03041
]
Complex C
Other components
Complex C specific factors
138094071 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
RRM_10
RBD_DEAH11
RRM_occluded
RRM_MARF1
RBD_RDR6
RRM_3
DUF4523
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
138094071
NCBI-ProteinID:
XP_068846330
LinkDB
All DBs
Position
17:31402405..31403571
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AA seq
388 aa
AA seq
DB search
MNIAAKYRQASLYVGDLHADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLQ
LADAQKALDTMNFDLIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSA
FGKILSSKVMSDDHGSRGYAFVHFQNQIAADRAIEEMNGTLLKDCRLFVGRFKSRKDREA
EFQNKAHEFTNVYIKNFGDEMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSH
EAAKRAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKHERFRRCQGAKLYIKNL
DETIDDEKLRREFSSFGSISRVKVMQEEGRSKGFGLICFSSAEEATKAMTEMNGRILGSK
PLNIALAQKPXERKTFCISQCVLQTEEC
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagcagccaagtaccgccaggcctccctgtacgtgggtgacctccatgctgac
gtcaccgaggacctgctgttcaagaagttcagcgccgtggggcccgtgttgtccatccgc
atctgcagggacctggtcacccgccgctccctgggctacgcctatgtgaactttctgcag
ctggcggatgcccagaaggcgctggacaccatgaactttgacttgataaagggcaaatcc
atccgtctcatgtggtctcaacgtgacgcctacttaaggaaatctggaattgggaacgtg
ttcatcaagaatctggacagatccattgataacaaaaccctttatgaacacttttcagcg
tttgggaagatcctgtcctccaaggtgatgagtgatgatcacggctccaggggctatgca
ttcgtgcactttcaaaaccagattgctgccgacagggccatcgaggagatgaatgggaca
ctgcttaaggactgcaggctgtttgttggcagattcaaaagccgcaaagatcgagaagcc
gagtttcagaacaaagcccatgaattcaccaatgtttacatcaaaaattttggagatgag
atggatgatgagaggctgaaggaagttttcagcaaatacggcaaaaccctgagtgttaag
gttatgacagattccagtggaaaatccaaaggctttggctttgtgagttttgatagccat
gaggctgccaaaagggctgttgaagaaatgaatggaaaggacataaacggacagctgctt
tttgtaggccgggcacagaagaaagcagagagacaggctgagttaaagcaaatgtttgag
cagctgaaacatgaaagatttcggcggtgccagggtgcgaagctctatattaagaacctg
gatgagaccattgatgatgaaaaactgcggagggaattttcttcatttggatcaattagc
agggttaaggtaatgcaggaagaagggcgaagcaaagggtttggcttgatctgcttctcc
tctgcggaggaggccactaaagcaatgacggagatgaatggccgcatcttaggctccaag
ccactcaacatcgccctggcccagaaaccctaggagaggaaaactttctgcatcagccag
tgtgtgctgcagactgaggaatgttag
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