Capricornis sumatraensis (Sumatran serow): 138095097
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Entry
138095097 CDS
T10522
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138095097 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138095097 (CPSF2)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
138095097 (CPSF2)
U7-dependent histone pre-mRNA processing factors
138095097 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
138095097
NCBI-ProteinID:
XP_068847171
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All DBs
Position
19:63851635..63882714
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AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKVTEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaactaccctttctggggtccaagaagaatctgctctttgc
tatcttctccaagtcgacgagtttagatttttattggactgtggctgggatgagcacttt
tctatggatattatagattccctgaggaagcacgttcaccagatcgatgcggtcttgttg
tctcatcctgaccccctccatcttggcgccctcccctatgctgttggaaagttgggtctg
aactgcgccatctatgcaaccattcccgtttataaaatgggacagatgttcatgtatgac
ctttatcagtcccgacacaatacagaagattttacactctttaccctagatgatgtggat
gcagcctttgataagatacaacagttaaaattctctcagattgtgaatttgaaaggcaaa
ggacatggcttgtctatcacacctctgccagctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccacttaaatggatgttccctggaaatgctaagcagaccctccttacttatcaca
gactcatttaatgctacttatgtgcagcccaggagaaaacaaagagacgagcagcttctg
acaaatgtcctggaaacactccgaggtgatggaaacgtattaatagcagtggacactgca
ggcagagttctggaacttgctcaactccttgatcagatttggagaactaaagatgctggc
ttgggtgtttactcactggcgctcctcaataatgtcagttataatgtggtggagttttct
aagtcccaggtagaatggatgagtgataagttgatgaggtgttttgaagacaaaagaaat
aatccgtttcagtttcgtcatctctctctgtgtcacggtctttctgacttggctcgagta
cctagccctaaagttgtacttgccagccaacctgacctggaatgtggattttcaagggat
ctctttattcagtggtgccaggaccctaagaactcgatcattctgacttacagaactact
cctgggactttagcacgtttcctaattgataatccttccgaaaaagttacagaaatagag
ttgaggaaacgtgtgaaacttgaagggaaagaacttgaagaatacttggaaaaagagaaa
ctaaagaaagaagctgctaaaaagcttgagcagtcgaaagaggcggacatagattccagt
gatgagagtgacgctgaggaagacattgaccagccatcagcgcataagaccaagcatgac
ctgatgatgaaaggtgaaggcagtcgtaaaggaagtttcttcaaacaggctaaaaagtct
tatcctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagaaattatc
aaaccagaggatttcttagtgccagaacttcaagctactgaagaagaaaaaagcaaatta
gagtctggcctgacaaatggagatgaacccatggatcaggatttatctgatgttcctact
aagtgtatttctacaacagaatctattgaaataaaagccagggttacttacatagactat
gaaggacgctctgatggggattccattaaaaaaatcatcaatcagatgaaaccacgccag
ttaatcattgtccatggaccaccagaagccagtcaggatcttgcagagtgctgtcgtgcg
tttggtgggaaagatattaaagtatacatgccgaagctgcacgagacggtcgacgccact
agtgaaactcacatctaccaggtgagattaaaagattcacttgtcagctcccttcagttt
tgtaaggcaaaagacgctgaactagcttggatagacggtgtcttagacatgagagtttcc
aaagtggacacgggagttattttagaagaaggagaactaaaagatgatggagaagactcc
gaaatgcaggtggatgcaccttcagattccagtgtcatagcgcagcagaaggccatgaaa
agtcttttcggagacgatgagaaagaaacaggtgaagaaagtgagatcattcctactctg
gaacccttaccacctcatgaggttcctggacatcagtcagtttttatgaatgaaccaaga
ctgtcagacttcaaacaagttcttttacgggaggggatccaagctgaattcgtaggaggt
gtgctcgtttgcaacaatcaagtggcagtccgtagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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