Capricornis sumatraensis (Sumatran serow): 138095801
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Entry
138095801 CDS
T10522
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138095801 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csum03021
]
138095801 (SF3B3)
03041 Spliceosome [BR:
csum03041
]
138095801 (SF3B3)
03036 Chromosome and associated proteins [BR:
csum03036
]
138095801 (SF3B3)
Transcription machinery [BR:
csum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
138095801 (SF3B3)
Spliceosome [BR:
csum03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
138095801 (SF3B3)
Complex B
138095801 (SF3B3)
Complex C
U2 SnRNP specific factors
138095801 (SF3B3)
Chromosome and associated proteins [BR:
csum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
138095801 (SF3B3)
TFTC complex
138095801 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
138095801
NCBI-ProteinID:
XP_068847799
LinkDB
All DBs
Position
20:complement(7388984..7428037)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacttgaccttgcagcgagccactggcatcagctttgccattcatggc
aatttctctggaaccaaacaacaggaaattgttgtttcccgaggaaagatcttggagctg
cttcgccctgatcccaacactggcaaagtgcacactctactaactgtggaagtatttggt
gtcatccggtcgctcatggcctttaggttgacaggtggcacgaaagactacattgtggtt
ggcagtgactcaggtcggattgttatcctggaataccagccatctaagaatatgtttgag
aagattcaccaagaaacctttggcaagagtggatgccgccgcattgttcctggccagttc
ttagctgtggatcccaaagggcgagctgttatgattagtgccattgagaaacagaaattg
gtgtatatcttgaacagagatgctgcagcccgacttaccatttcatctccactggaggct
cacaaagcaaacactttagtgtatcacgtcgttggagtagatgtgggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaactggggaagca
gcagctaatacccagcagacgcttactttctacgaattagaccttggtttaaatcacgta
gtccgaaaatacagtgagcctttggaggaacatggaaacttcctaattacagttccaggg
ggatcagatggtccaagtggagtgctaatctgctccgaaaactacattacctataagaac
ttcggtgaccaaccggatatccgctgtccaattcccaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtctgctctgccacccataagaccaaatcaatgttcttc
tttttggctcaaactgagcagggagatatctttaagatcactttggagacagatgaagat
atggttactgagatccggctcaagtattttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttccttttcgtagcatcagaatttggaaaccattacttgtatcaa
atcgcacatcttggagatgacgacgaggaacctgagttttcatctgccatgcctctagaa
gaaggagacacattcttctttcagccaagaccactgaaaaaccttgtgttggttgatgag
ttggacagcctctctcccattttgttttgccagatagctgatctggccaatgaagacact
ccccagctctatgtggcctgtggtaggggaccgcggtcatctctgagagtcttaaggcat
ggacttgaggtatcagaaatggctgtctcagagctacccggcaaccccaatgctgtctgg
acagtgcgtcggcacattgaagatgagtttgatgcctacatcattgtgtccttcgtgaat
gccacactggtgttgtccatcggagagactgtagaagaagtgacggattccgggtttctg
ggcaccacccctaccttgtcctgctccttgctaggagatgatgccttggtgcaggtgtat
ccggatgggattcggcacatccgagcagacaagcgagtcaatgagtggaagactcctggg
aagaaaacaattgtgaaatgtgcagtcaaccagcgacaagtggtgatcgccctaacagga
ggagagctggtctattttgaaatggatccctcaggacagctgaacgagtacacggagcgg
aaggagatgtcagcagatgtggtatgcatgagtctggccaatgtgccccctggagagcag
cggtctcgctttctggctgtggggctagtggacaacactgtcaggatcatctccttggac
ccctcagactgtttacagcctttgagcatgcaggctctcccggcccagcctgagtccttg
tgtattgtggaaatgggtgggaccgagaagcaggatgagctgggggagagaggctctatt
ggcttcttgtacctgaatattggactccagaatggtgtgttgctgagaactgtcctggac
cctgtcactggggacctgtctgacacccgcactaggtacctggggtcccgtcctgtgaaa
ctgtttcgtgtccggatgcaaggccaggaggcagtgctggccatgtcaagccgctcatgg
ttgagctattcttaccagtctcgtttccatctcacgcccctgtcttacgagaccctggag
tttgcctctggcttcgcctctgaacagtgccctgagggcattgtggccatctccaccaat
accctgaggattttggcattggaaaagctgggtgctgtcttcaatcaagtagcctttcca
ctgcagtacacacccaggaaattcgtcatccaccctgaaagtaacaaccttatcatcatc
gagactgaccacaatgcctacactgaggccactaaagctcagaggaagcagcagatggca
gaggaaatggtagaagcagcaggggaggatgagcgagagctggctgcagagatggcagca
gcattcctcaacgaaaacctccccgagtccatttttggggctcctaaggccggcaatggg
cagtgggcctctgtgatccgagtgatgaatcctattcaggggaacacattggatcttgtc
cagctggaacagaatgaagccgcttttagcgtggctgtgtgcaggttctccaacactggc
gatgactggtatgtgctggtgggcgtagccaaagacctgatactgaacccccgatctgtc
gcggggggctttgtttatacctacaagctcgtgaacaacggggaaaaactggagtttttg
cacaagactccagtggaagaggtccctgctgctattgccccatttcaagggagagtattg
attggtgtgggaaaacttctgcgagtctatgacctcggaaagaagaagttactccgcaag
tgtgagaacaagcatatcgccaactacatctctgggatccagacaattggacacagggtg
attgtatctgatgtccaagaaagtttcatctgggttcgctacaagcgtaatgagaaccag
ctcatcatctttgctgatgatacctacccccgatgggtgaccacagctagtctcctcgac
tatgatactgtggctggggcagacaagtttggcaacatttgtgtggtgcggctcccaccc
aataccaatgatgaagtggacgaggatcccactggaaacaaagccctgtgggaccggggc
ttgctcaacggagcctctcagaaggcagaagtgataatgaactatcacgtgggcgagaca
gtgctttccttacagaagaccacactgatccctggaggctcagaatcgcttgtctacacc
accttgtcaggaggcattggcatccttgtcccattcacatcccatgaggaccatgacttc
ttccagcatgtggaaatgcacctccggtccgagcacccccctctctgtgggcgagaccac
ctcagctttcgttcctactatttccctgttaagaatgtgattgatggagatctctgtgaa
cagttcaactccatggagcccaacaaacaaaagaatgtctctgaagaactggaccgaacc
ccacccgaggtgtccaagaagcttgaggatatccggactcgctatgccttctga
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integrated database retrieval system
