KEGG   Capricornis sumatraensis (Sumatran serow): 138095842
Entry
138095842         CDS       T10522                                 
Symbol
LIG1
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
csum  Capricornis sumatraensis (Sumatran serow)
Pathway
csum03030  DNA replication
csum03410  Base excision repair
csum03420  Nucleotide excision repair
csum03430  Mismatch repair
Brite
Enzymes [BR:csum01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     138095842 (LIG1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     138095842 (LIG1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     138095842 (LIG1)
DNA replication proteins [BR:csum03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    138095842 (LIG1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     138095842 (LIG1)
DNA repair and recombination proteins [BR:csum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     138095842 (LIG1)
   NER (nucleotide excision repair)
    Other NER factors
     138095842 (LIG1)
   MMR (mismatch excision repair)
    Other MMR factors
     138095842 (LIG1)
SSDB
Other DBs
NCBI-GeneID: 138095842
NCBI-ProteinID: XP_068847865
LinkDB
Position
20:complement(60197116..60223369)
AA seq 957 aa
MERLGPQPEGLLAASPALLCGCRNRKLVAREEEEGGENSDTIMQRSIRSFFQPKKEGKVK
KPEKETSNSIRETESPPKVALKERNRVVSDSDSPVKRPGRKATRVLGSEGEEEEEEAPTT
PRSQEPASDSPQPSPPSPVTLPESSPSRSSPSPAVAPPSGIPKRRTARKQLPKRTFQDVL
KEQGEDEDPETKKKKEEGEAETPTESLPEPEGGDKEEVEGGDQPTTPPEPQTSTESPTES
VSEPGVTVKQEPQEDGQAQPPPKAPKTLSSFFSPRKPAVKKEAKEGPGALRKDETKGHLD
PPSYNPAKNNYHPIEDACWKAGQRVPYLAVARAFEKIEEVSARLRMVETLSNLLRSVVAL
SPADLLPVLYLSLNRLGPPQQGLELGIGEGILLKAVAQATGRQLESVRAEVAEKGDVGLV
AESSRSTQRLVLPPPALTAAGVFAKFRDIAQLAGSASTTKKMDVIKGLFVACRHSEARFI
ARALSGRLRLGLAEQSVLAALAQAVSLTPPGQECPPAVVDAGKGKTAEARKMWLEEQGMI
LKQTFCEVPDLDRIVPVLLEHGLERLPEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEEAA
FTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGRYPDIISRIPKIKLPSVTSFILDTEA
VAWDREKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLL
RENFVETEGEFVFATSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNW
LKLKKDYLEGVGDTLDLVVIGAYLGKGKRAGRYGGFLLASYDEESEEFQAICKLGTGFSD
EELEEHHQRLQALVLPTPRSYVRADGAVAPDHWLDPSDVWEVKCADLSLSPIYPAARGLV
DSEKGISLRFPRFIRVREDKKPEQATTSAQVAGLYKKQSQIQNQQGAELDSEQEEFY
NT seq 2874 nt   +upstreamnt  +downstreamnt
atggagaggcttggaccgcaacccgaaggactcctggcggctagtcccgctctactctgc
ggttgcaggaacaggaaactggtggccagagaggaggaggaggggggagagaattctgat
accatcatgcagcgaagcatcaggtcatttttccagcccaagaaagagggcaaagtgaag
aagccagagaaggagacctccaacagcatcagagaaactgagtcccctccgaaggtggca
ctgaaggagcggaatcgagtggtgtctgacagtgactctccagtgaagaggccggggagg
aaggcaaccagggtcctgggcagcgagggcgaggaggaggaagaggaagcccccaccacc
cccagaagccaggagcctgcttcagactctccacagccctcacctcccagtcctgtcaca
ctgcctgagagcagcccttcccgctccagcccctccccagcggttgcgcccccatcaggg
atcccgaagcgtcgcacggcccggaagcagcttcccaaacggacatttcaagatgtcctg
aaagagcagggcgaggacgaggacccggagactaagaagaagaaggaggaaggagaagca
gagacaccaacagaaagcctcccagagcctgaagggggcgacaaggaggaagtggaaggc
ggggaccagcccacgacgccccctgagccccagacctccacagagtccccgacagaaagc
gtttcagagcccggggtgacggtgaagcaggaaccgcaggaggatggccaggctcaaccg
ccccccaaagctccaaagaccctcagcagtttcttctccccccggaagccagctgtcaaa
aaagaagcgaaagaaggacctggtgctctaagaaaggacgagaccaagggacacctggac
ccaccgagctacaatcctgccaagaacaactaccaccccatcgaggatgcctgctggaag
gcgggccagagggtcccttatctggctgtggcccgggcgttcgagaagatcgaggaggtc
tctgctcggctccggatggtggagacgctgagcaacctgctgcgctccgtggtggccctg
tcacctgctgacctcctacccgtcctctacctcagcctcaaccgcctggggccgccccag
cagggcctggagctcggcatcggagagggcatcctcctcaaggcagtggcccaggccacg
ggtcggcagctggagtccgtccgggccgaggtggccgagaagggtgatgtgggactggtg
gccgagagcagccgcagcacccagaggctcgtgctgcccccacctgcgctcaccgccgcc
ggcgtcttcgccaagttccgggacatcgcgcagctggcgggcagcgcttccaccaccaag
aagatggatgtcatcaaaggcctctttgtggcctgccgtcactcagaggcgcgtttcatt
gccagagccctgagtggacggctgcgcctcgggctggctgagcagtcggtgctggcggcc
cttgcccaggccgtgagcctcacgccccctggtcaagaatgcccccccgccgtggtggac
gctgggaagggcaagacagcagaagccagaaagatgtggctggaggagcaaggcatgatc
ctgaagcagaccttctgtgaggtacctgacctggaccggatcgtccccgtgctgctggaa
cacggcctggagcggctcccggagcactgcaggctgagcccaggggttcccctgaaacca
atgttggcccaccccacccggggtgtcagcgaggtcctgaagcgctttgaggaggcagct
ttcacctgtgaatacaaatacgacgggcagagggcacagattcacgttctggaaggtggg
gaggtgaagatcttcagcaggaatcaggaggacaatactggaaggtaccctgacatcatc
agccgcatccccaagattaaactcccatcagtcacatccttcatcctagacacagaagct
gtggcttgggaccgggaaaagaagcagatccagccattccaagtgctcaccacccgcaaa
cgcaaggaggtggacgcggcagagatccaggtgcaggtgtgtctgtatgccttcgacctc
atctacctcaacggagagtccctggtacgtgagcccctctcccgacgccggcagctgctc
cgggagaacttcgtagagacggagggcgagttcgtctttgccacctccctggacaccaag
gacacggagcagatcgctgagttcctggagcagtcggtgaaagactcctgcgaggggctg
atggtgaagaccctggacgtggacgccacctacgagatcgccaagaggtcacacaactgg
ctcaagctgaagaaggactacctcgagggtgtgggcgacaccctggacctcgtagtgatt
ggtgcctacctgggcaaggggaaacgggccggccggtacggaggcttcttgctggcctca
tacgatgaggagagcgaggagttccaggccatctgcaagctcggaactggcttcagtgac
gaggagctggaagagcaccaccagaggctccaggccttagtgctgcccaccccgcgctcc
tatgtccgggctgacggcgcggtggcccccgaccactggctggaccccagcgacgtgtgg
gaggtgaagtgcgcggacctctccctgtcccccatctaccctgcggcccggggcctggtg
gacagcgagaaggggatctccctccgcttcccccggtttattcgtgtccgtgaggacaag
aagccggagcaggccactactagtgcccaggtggccggtctgtacaagaagcagagtcag
attcagaaccagcagggtgctgagctggactccgagcaggaagagttctactag

DBGET integrated database retrieval system