Capricornis sumatraensis (Sumatran serow): 138095998
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Entry
138095998 CDS
T10522
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03015
mRNA surveillance pathway
csum04530
Tight junction
Brite
Transcription machinery [BR:
csum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138095998 (SYMPK)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
138095998 (SYMPK)
U7-dependent histone pre-mRNA processing factors
138095998 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
138095998
NCBI-ProteinID:
XP_068848136
LinkDB
All DBs
Position
20:complement(58700618..58733619)
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AA seq
1272 aa
AA seq
DB search
MAASSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLNVLKHPASLEFQAQITTLLVDLGTPQVEIARNMPSSKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLPAQGQAISVVGSLSSMSSLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGVKGALDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSAKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMAILEASGKQEPEAKEAPAGPLEEDDLEPLALAPPPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGLGAPSSSSSSSSVRPGPPQPEEAIDFREEGPECETPA
IFISMDDDSGLTEAALLDSSLEGPLPKETAAGGLLSKEERSPQPLTAAGEDTMQTPSPAT
EEAGEPETKGNS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggcagccagcagtggggacagcgtcacacgccggagcgtggcatcacagttcttcact
caagaggaggggccaggcatcgatggcatgaccacatcagagagagtggtagatctcctg
aaccaggcggcactgatcaccaacgactcaaagatcacagtgctcaaacaggtgcaggaa
ctgatcatcaacaaagatcccacactactggacaacttcctggatgagatcatcgctttc
caggcagacaagtccatcgaagtgcgcaagtttgtcatcggcttcatcgaggaggcttgc
aagcgagacattgagctgctgctgaaactgatcgcgaacctcaacatgctcttgagggat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtgatcagtgagctccaggaggcctgctgggatatg
gtgtcggccatggctggggacatcatcctgctgctggactctgacaacgacggcatccgt
acccatgccatcaagttcgtggagggcctcatcgtcaccctctcgccccgcatggctgac
tcggaggtgccccgacgccaggagcacgacatcagcctggaccgcatccctcgtgaccac
ccctacatccagtacaatgtgctgtgggaagaaggcaaggcagccttggagcagctgctc
aagttcatggtgcaccctgctatctcctccatcaacctgaccacagccctgggctccctg
gccaatattgcccgccagaggcccatgttcatgtcggaggtgattcaggcctatgaaacc
ctccacgccaatctgcccccaacgctggccaaatctcaggtgagcagcgtgcgtaagaac
ctcaagttgcacctgttgaatgtgctgaagcacccagcgtccttggagttccaggctcag
atcaccaccctgctggtggacctgggcacgcctcaggtggagatcgcccgcaacatgccc
agcagcaaggatgcccgcaagcggccccgagacgactcggattccacgctcaagaagatg
aagctggagcccaacctgggggaagacgatgaggacaaggacttggagccaggcccctcg
ggaacctcgaaggcctcagcccagatctcaggccagtcagacacggacatcacagccgaa
ttcctccagcctctgctgacacccgacaacgtggccaatctggtcctcatcagcatggtg
tacctgcccgaggccatgcccgcctccttccaagcgatctacaccccagtggagtcagca
ggcaccgaagcccagatcaagcacctggctcggctcatggccacgcagatgacggctgca
ggactggggccaggcgtggagcagaccaagcagtgcaaggaggagcccaaggaggagaag
gtggtgaagccagagagcgtcctgatcaagcggcgcctgcccgcccagggccaggccatc
tcggtagtgggctccctgagctccatgtcctccctggaggaggaggcgccccaggccaag
aggaggccggagcccattatccccgtcacgcagccccggctggcaggcgctggtgggcgc
aagaaaatcttccgcctaagtgacgtgctgaagcccctgacggacgcacaggttgaggcc
atgaagctgggcgctgtgaagcggatcctgcgggccgagaaggctgtggcctgcagcggg
gccgcccaggtgcgcataaagatcctggccagcctggtgacgcagttcgactcgggcctg
aaggccgaggtcctgtccttcatcctggaggacgtccgggcccgcctggacctggccttc
gcctggctctaccaggagtacaacgcctacctcgcagctggcgtcaagggtgccctggac
aagtatgaggactgcctcatccgcctgctctccggcctgcaggagaagccggaccagaag
gacgggatcttcaccaaggttgtgctggaggcacctctgatcacggagagcgccctggag
gtgattcgcaagtactgcgaggacgagagtcgcacctacctgggcatgtccactctccga
gacctgatcttcaagcgcccatcccgccagttccagtacctgcatgtcctgctagacctc
agctcccacgagaaggacaaggtgcgttcccaggccttgctgttcatcaagcgcatgtac
gaaaaggaacagctgcgagagtacgtggagaagtttgccctcaattacctgcagctcttg
gtccaccccaacccgccgtcggtgctgtttggagccgacaaggacacagaggtggccgca
ccctggaccgaggagacggtgaagcagtgcctgtacctctacctggctctcctccctcag
aaccacaagctgatccacgagctggcggccgtgtacacggaggccatcgctgacatcaag
aggacggtgctgagggtcattgaacagccgatccgggggatgggcatgaactcgccagag
ctgctcctgctggtggagaactgtcccaagggggcggagacactggtcacacgctgtctg
cacagcctcacagacaaagtgcccccgtccccggagctggtgaagcgggtcagggatctc
taccacaagcgactgccagacgtccggttcctcatcccagtgctcaatgggctggagaag
aaggaagtgatccaggccctgccaaagctcatcaagctcaaccccatcgtggtgaaagaa
gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcagccctgtcccccctg
aaccctggagagctgctcatcgccttacacaacattgactcagcaaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcggaggtg
ctggccgtggtgatgcagcaactgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtccctgactatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccggctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcagcgcaccaagccccagagcttccaggtcatcctgcagctcccaccccaacag
ctgggggccgtctttgacaagtgcccagagctccgggagcccctgctggcccacgtccgc
tccttcaccccccaccagcaagcacacatccccaactccatcatggccatcctggaggcc
agcggcaagcaggagccagaggctaaggaagcacctgccgggcccctggaagaggatgac
ttagagcctctggccctggcaccacctccggccccccgaccccctcaagatctcatcggc
ctgcggctggcccaggagaaggccttaaagcggcaactggaggaagaacagaagctgaag
cctgggggactgggagccccctcctcgtcctcgtcctcttcctcggtgcggccaggcccc
ccccagccggaggaagccattgatttccgggaggaggggcctgagtgtgagaccccggcc
atcttcatcagcatggacgatgactcggggctgactgaggccgcactgctggactctagt
cttgagggacccctacctaaggaaactgcagcaggtggattgctttcaaaggaggagcgg
agcccccagcccctcacagctgctggagaagacacaatgcagacccccagccctgccact
gaggaagcgggcgaaccggaaaccaagggaaatagctga
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integrated database retrieval system
