Capricornis sumatraensis (Sumatran serow): 138096164
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Entry
138096164 CDS
T10522
Symbol
CDH5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04514
Cell adhesion molecule (CAM) interaction
csum04520
Adherens junction
csum04670
Leukocyte transendothelial migration
csum05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
138096164 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
138096164 (CDH5)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
138096164 (CDH5)
09160 Human Diseases
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
138096164 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csum04515
]
138096164 (CDH5)
04090 CD molecules [BR:
csum04090
]
138096164 (CDH5)
Cell adhesion molecules [BR:
csum04515
]
Cadherins
Major cadherins
138096164 (CDH5)
CD molecules [BR:
csum04090
]
Proteins
138096164 (CDH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
138096164
NCBI-ProteinID:
XP_068848344
LinkDB
All DBs
Position
20:39750915..39790106
Genome browser
AA seq
783 aa
AA seq
DB search
MQALVMLLAAGGTCYLGLLAAAAAAANPGRPNALGSLPAHRRQKRDWIWNQMHIDEERND
SLPHYVGKIKSSVDRKNTEYQLRGESAGKVFRVDKNTGDVYALERLDREKISEYHLTALV
VDKDTKRNLESPSSFTIKVHDVNDNWPVFTHRVFNASVPEMSGIGTSVIQVTAVDADDPT
VADHASVVYQLTKGKDSFDIRGPGLIVTMNKHLDRETQDKYEVVVEAEDAQGRRGESGTA
TVFITLQDVNDNFPIFTQTRYTFSVPEDIRVGSPLGSLFVEDPDEPQNRKTKYSFVQGEY
RDTFTIETDPTHNEGIIKPIKPLDYERIPQYSFTIEATDPTIDLRYLGSTSPKNIARVII
NITDVDEPPIFQQPFYHFQLQENQKKPLIGSVLAKDPDAAQRDIRYSIRRTSDKGQFFGI
TKKGDIYNDKELDREVYPWYNLTVEAKEVDSSGTPTGKESIVQVYVEVMDENDNAPEFAK
PYEPKVCENAPQGKLVVQISATDKDITPRDVKFKFSLSTEDSNFTLIDNHDNTANIIVKY
GYFDRERAKVHHLPVLISDNGRPSLTGTSMLHVTVCKCNEHGEFTLCEEVAAQVGISIQA
LVAIFLCILTITVITLLIILRRRLQKQARAHGKSVPEIHEQLVTYDEEGGGEMDTTSYDV
SVLNSVRHGGAKPPRPALDARPSLYAQVQKPPRQAPGAHAPGEMAAMIGVKKDEADHDGG
GPPYDTLHIYGYEGAESIAESLSSLGTDSSDSDIDYDFLNDWGPRFKMLAELYGSDPQEE
LVY
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcacttgtgatgctgctggctgcagggggcacctgctacctgggcctgctggca
gcagctgcagcggccgccaaccctggccgacccaacgccctcggctcgctgccggctcac
cggcgccagaagagagactggatctggaatcagatgcacattgacgaagagagaaatgac
tcgctgccccattacgtgggcaagattaaatcgagtgtggaccgcaagaacaccgagtac
cagctcagaggagagtctgccggcaaggtcttccgggtcgacaagaacacaggcgatgtg
tacgccttagagaggctggacagggagaaaatctccgagtaccacctcactgccctcgtg
gtggacaaggacaccaagaggaacctggagtctccttccagcttcaccatcaaagttcac
gacgtcaacgataactggcctgtgttcacccaccgggtgttcaacgcctccgtgcccgag
atgtcagggatagggacctcggtcatccaggtaacagcagtggacgcagatgaccccaca
gtggcagaccacgcttctgttgtgtaccagctcacaaagggaaaagacagtttcgacatc
cgtggccctggactcattgtcaccatgaacaaacacctggaccgagagacgcaggataag
tacgaggttgtggtggaagcagaagacgcccagggccgccggggggagtcaggcacagcc
accgtgttcatcactctgcaggacgtcaacgacaacttccccatcttcacccagaccagg
tacacattttctgtgccagaagacatccgtgtgggcagccccctgggctctctgtttgtt
gaggacccagatgagccccaaaaccggaagaccaagtacagcttcgtgcagggcgagtac
agggacaccttcaccatcgagacggaccccacccacaacgagggcatcatcaagcccata
aagcccctggactatgaacgcatcccgcaatacagcttcaccatcgaggccacagacccc
accattgacctccgctacctgggcagcacctcccccaagaacatcgcccgtgtcattatc
aacatcacagacgtggacgagccccccatcttccagcagcctttctaccacttccagctg
caggagaaccagaagaagcctctgattggctcggtgctggccaaggaccctgacgctgct
cagcgggacatcaggtactccatccgcaggaccagtgacaagggccagttcttcggaata
accaagaaaggggatatttacaacgacaaagaactggacagagaagtgtacccttggtac
aacctgacagtggaggcaaaagaggtggattctagtgggactcccacaggcaaagaatcc
atcgtgcaggtctacgttgaagttatggatgagaatgacaacgccccagagttcgccaag
ccctatgagcccaaagtgtgtgagaatgcaccccagggcaagctggtcgtgcaaatctca
gcaacagacaaggatataacaccacgagatgtgaagttcaagttctccctgagcactgag
gacagcaacttcaccctcattgataatcacgataacacggccaacatcatagtcaagtac
gggtattttgaccgggagcgcgccaaggtccaccacctgcccgtgctcatctcggacaac
gggaggccaagcctcacgggcaccagcatgctgcacgtgaccgtgtgcaagtgcaacgag
catggcgagttcaccctgtgcgaggaggtggctgcccaggtgggcatcagcatccaggcg
ctggtggccatcttcctctgcatcctcaccatcacagtgatcaccctcctcatcattctg
cggaggcggctccagaagcaggcccgcgcccacggcaaaagcgtgccagagatccacgag
cagctggtcacctacgatgaggagggcggtggcgagatggacaccaccagctacgacgtg
tcagtgctcaactcagtgcgccacggaggggccaagcccccacgcccagcgctggacgcg
cggccgtccctctacgctcaggtgcagaagccaccccggcaagcgcccggggcgcacgcg
cccggggagatggccgcaatgatcggggtgaagaaggacgaggcggaccacgacggcggc
ggcccgccctatgacacgctgcacatctacggctacgagggcgccgagtccattgccgag
tccctcagctccctgggcacggattcatcggactcggacattgattatgactttctcaat
gactggggacccaggttcaagatgctggccgagctgtatggctcagacccccaggaggag
ctggtgtattag
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