Capricornis sumatraensis (Sumatran serow): 138096338
Help
Entry
138096338 CDS
T10522
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
138096338 (SHANK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
138096338
NCBI-ProteinID:
XP_068848589
LinkDB
All DBs
Position
20:complement(62045480..62092385)
Genome browser
AA seq
2173 aa
AA seq
DB search
MTHSPASSEEEERHSASECPEGGSESDSSPDGPGRGPQGTRGRGSAAPGSLASIRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGISDENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNSGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGTGLTVPPALLRANSDTSMALPDWMVFAAPGTSSAGAPGPTSGPQGQVQPAAPSAK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEAKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
AISLRSKSMTSELEEMEYEQQPPPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPG
PGGLASLGKHRPKGFFTTESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIGAAEDDRPY
LAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGGLFNPSSGG
THPASSPASFDGPAPPDTRIGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAHP
PHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGALSPSHHGSGGGAGGPSQAP
ALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVVEGEPQKGGGLPPAPSPTSPASPQ
PPPPPPPAAAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPSQAEAAGGGGGGG
GGSSAPSPAPAVSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARREGGWQNEARR
RSTLFLSTDAGDEPDGGDSSLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESAAAGSSYA
GYAAGSRAYGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSEGGGPP
QPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSLP
ASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPAPHPGVSKPWRSGAPPEEPERLPLHVR
FLENCQPRAGGAGGRAPPSEDGPGVPPPSPRRSVPPSPTSPRGSEENGLPLLVLPPPAPS
VDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPTPTTPLPPVPPPAVAAA
PPTLDSTASSLTSYDSEVATLTQGAPAAPGDPPPPGPPAPAAPAPPPPQPGPDPPPGTDS
GIEEVDSRSSSDHPLETISSASTLSSLSAEGGGGAGGGTGSVGGSGGASVAGGPELLDTY
VAYLDGQAFGGSGTPGPAYPPQLMTPSKLRGRALGAGGGLRPGPGGGLRDPVTPTSPTVS
VTGAGTDGLLALSGCPGSSTAGVAGGPVAVEPEGPPVPLPSASSLPRKLLPWEEGPGPPP
PPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHGG
ASYVPERTSSLQRQRLSEDSQSSLLSKPVSSLFQNWSKPPLPPLPTGTAVSPSAAAAPGA
TSPSASSSSTSARHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPL
YPGLFDIRGSPTGGAGGSADPFAPVFVPPHPGMSGSLGGALSGASRSLSPTRLLSLPPDK
PFGAKPLGFWTKFDVADWLEWLGLAEHRARFLDHEIDGSHLPALTKEDYVDLGVTRVGHR
MNIDRALKFFLER
NT seq
6522 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaagaagaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggcccgggagaggcccccaggggacc
cggggccggggcagcgcagcacctggtagcctggcctcgatccgaggcctccagggccgc
tccatgtccgtcccagacgacgcccacttcagcatgatggtttttaggatcggcatccct
gaccttcaccagacaaaatgcctgcgcttcaaccccgacgccaccatctggacggccaag
cagcaggtgctctgtgccctgagcgagagcctccaggacgtgctcaactatggcctgttc
cagccggccacctcgggccgggatgccaacttcctggaggaggagcgactgctgcgggaa
tatccccagtccttcgagaagggggtgccctacctggagttccgatacaagacccgtgtt
tacaagcagaccaacctggatgagaagcagctggccaagttgcacacgaagacggggtta
aagaagttcctggagtacgtgcagctcgggacatccgataaggtggcacggctgctggac
aaggggctggaccccaattatcacgactcagattcaggagagacccccctgacgctggct
gctcagactgaaggctctgtagaggtgattcgaaccctatgcctgggtggggcgcacatc
gacttccgggcccgggatggcatgactgcgctacacaaggccgcctgtgcccgccactgc
ctcgctctgacggcgctcctggatcttgggggctcccccaactacaaggaccgccgaggg
ctgactcccctgttccacacggctatggtggggggtgacccccgctgctgcgagctgctc
ctgtacaacagggcccagctgggcatatctgatgagaacggctggcaggagattcaccag
gcctgccagcggggtcattctcagcatctggaacatctgctcttctacggagctgagcct
ggagcccagaacgcctcagggaacacggccctgcacatctgtgccctctacaataaggag
acgtgtgctaggatccttctctaccgaggggccaacaaggatgtcaagaataacagtgga
cagacccccttccaggtggcagtgatcgctgggaattttgaactcggggagctgatccga
aaccatcgagaacaggatgtggtgcccttccaggagtcccccaagtatgcagcccggcga
cggggacccccgggcacagggctgacggtgccccccgcactgctgcgggccaacagtgat
accagcatggccctgcccgactggatggtgttcgccgccccggggacctcgtccgcaggg
gcccccggccccacctcagggccccagggccaggtgcagcccgccgcccccagcgccaag
ctcagcagcgggaccctgcgaagtgccagcagcccccggggcgcccgggcccgctccccg
tcccgcgggaggcaccccgaggaggccaagcgccagccccgtggacggcccagctccagc
gggacaccccgggaagggccggccgggggcacggggggctctgggggccccgggggctcc
ctgggcagccgcgggagacgcaggaagctctactcggcggtccccggacgctccttcatg
gccgtgaagtcctaccaggcccaagccgagggggagatctccctgagcaagggtgaaaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgcgtc
ggctggttcccctctgactgcctggaagaggtggccaaccgctcccaggaagcaaagcaa
gaaagccgaagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagcttgatggatgggattggcccagggagcgattacatcatcaaa
gagaagacagttctgctgcaaaagaaggacagtgaggggtttgggttcgtgctccggggc
gccaaggcgcagacccccatcgaggagttcacccccaccccagccttcccggcactgcag
tatctggagtcggtggacgagggtggcgtggcatggcgggctggactgcgaatgggagac
ttcctcatcgaggtgaacgggcagaacgtggtgaaggtcggccaccggcaggtggtgaac
atgatccgacaagggggcaacacgctgatggtcaaggtggtgatggtcaccaggcacccg
gacatggatgaagctgttcacaagaaagcaccccagcaagctaagcggctgccgccccca
gccatctccttgcgttccaagtctatgacctccgagctggaggagatggagtacgagcag
cagccgccgccggtgcccagcatggagaaaaagaggactgtgtatcagatggctctcaac
aaactggatgaaatcttggcggcagctcagcagaccatcagtgctagtgagagtcctggg
cctggtggcctggcgtctctgggcaaacaccgacccaaaggcttctttaccactgagtcg
agctttgatccccaccaccgctcccagccaagttacgaacgtccttcctacctgcctcct
ggacccgggctcatgctccggcaaaaatctattggggctgcagaagacgatagaccctac
ctagcacccccagccatgaagttcagccgcagtctgtctgtgcctggttcggaggacatc
cccccgccgcccaccacgtccccaccagagcccccctacagcacgcctccagccccgtcc
tcctccggccgcctcactccctctccccggggtgggctcttcaatcccagctcaggtggc
acccacccagcctcgtccccggcgtccttcgatgggcccgccccccctgacacccggata
gggagccgagagaagagcctgtatcacagcgggcccctgcccccagcccaccaccacccg
ccccaccaccaccaccaccacgccccgcccccccagccccaccaccaccacgcccacccg
cctcacccgccggagatggagaccggcggctcccccgacgaccccccaccccgcctggct
ctggggccccagcccagcctacgaggctggcggggcggcgggcccagcccgaccccaggg
gccctgtccccgtcgcaccacggcagcgggggcggcgccggcggcccctcccaggctccg
gcgctgcgctacttccagctgcctccgcgggcggccagcgcggccatgtacgtgcccgcc
cgttccggccgcgggcgcaagggcccgctggtcaagcagaccaaagtcgtcgaaggcgag
ccccagaagggcggcggcctcccgcccgccccctcgcccacgtctccggcgtccccgcag
ccaccgccgccgccgccgccggccgcggccgccccgtcggaaaagaactccatccctatc
cccacaatcatcatcaaggcgccgtccaccagtagcagcggccgcagcagccaggggagc
agcaccgaggcggagcccccgagccaggccgaggccgcgggcggcgggggcggcggcggc
ggcggctcttccgcgcccagccccgccccggccgtgtcgcccgtgccgccgtccccctcg
cccgtgcccacccccgcctcgcccagcggcccggccaccctggatttcaccagccagttc
ggagcggccctggtgggggcggctcgaagggaagggggctggcagaacgaagcccgccgg
cggtccacgctgttcctctccaccgacgcgggggacgagcccgacggcggcgacagctcg
ctgggcccaggggcgcccccgggcccccggctgcgccactccaagtccatcgacgaaggc
atgttttcggccgagccctacctccggctggagtcggcggccgccggcagcagctacgcg
ggctacgcggccggcagccgagcctacgggggcagcagcgccttcaccagcttcctgccg
ccgcgacccctggtccacccgctgaccggcaaggccctggacccggcctccccgcttggg
ctggccctggccgcccgggagcgggcgctgaaggagtcctcggagggcggtgggcctccc
cagccccctccaaggcctccatcgccccgctacgaggccccgccgcccaccccgcaccac
cactcgccccacgcccaccacgagccagtgctgcgcctctggggagcctcgcccccggac
ccggcccgccgggagctggggtaccgggcagggctgggcagccaggagaagtcccttccg
gccagcccaccggcggcccgacgctccttgctgcaccgcctacctcccacagctcccggg
gtcgggcccctccttctgcagctggggcccgagcctcccgccccgcaccccggggtgagc
aagccctggagatccggcgcccccccggaggagcccgagcggctgcccctccacgtgcgg
ttcctggagaactgccagccccgggccgggggggcgggtggaagggcccccccctcggag
gacgggccgggggtcccgccgcccagcccgcgccgctctgtgccgccctcgccgacctcc
ccgcggggcagtgaagagaacgggctccccctgctggtcctgccgccgcccgccccctcg
gtggacgtggaagacggcgaattcctctttgtggagccgctgcccccgcccctcgagttt
tccaatagcttcgagaagccggagtcgcctctcacgccggggcctccccacccgctgccg
gacccacccaccccgaccacccccttgccccctgtgccgcccccggccgtggccgccgcc
cctcccaccctggactcgaccgcatccagcctgacttcctatgacagcgaggtggcaacg
ctgacccagggggcccccgcggctcctggggatccccctccgccaggccctcccgcccca
gccgccccggctcccccacccccccagcctggcccagaccctcccccgggcacggattct
ggtattgaggaggtggacagtcggagcagcagcgaccaccccctggagaccatcagcagc
gcctccacgctgagcagcctgtccgctgaaggcgggggcggcgcagggggcggaactggc
agcgttggaggcagtggtggcgccagcgtggccggtgggccagagctcctggacacctac
gtggcctacctggatggccaggccttcgggggcagtggcactcccggccctgcatacccc
ccgcagctcatgactccctctaagctccggggccgggcgctcggggccggcggaggcctg
cggccgggacccggtgggggactgcgagaccctgtcactcccaccagccccactgtctca
gtgacgggggcgggaaccgatgggctgctggccctgagcggttgtccgggatcctcgacg
gcaggcgtggctggcggccccgtggctgtagagccagaaggtccgccagtgcccttgcca
tcggcctcctccctgcctcggaagctgctgccctgggaggagggcccgggcccgccgccg
ccccctctgccggggcccttagcccagcctcaggcctcagccttggccactgtaaaagcc
agcatcatcagtgaactcagctccaagcttcagcagtttgggggctcctcggcagctggt
ggcgctctgccgtgggcccggggaggcagcgggggaagcggggacagccaccacggggga
gccagctacgtccccgagcggacttcctccctgcagcggcagagactctcggaagactcc
cagtcctcgctcctctccaaacctgtgagcagcctgtttcagaactggtccaaaccacct
ctgccgccactccccacgggaaccgcggtgtccccttcagccgctgcagccccgggggcc
acctccccatcggcttcctcctcctccacgtccgcccgccacctccagggcgtggagttc
gagatgcgcccacctttgctccgccgggcccccagcccctcattgctgcccgcctcggag
cacaaggtcagccctgcgccccggccctcgtccctacccatcctgccttccggacccctc
tacccgggcctctttgacatccgaggctcccccaccggaggggcaggaggctcggccgac
cccttcgcccccgtctttgtaccgccgcaccccgggatgtccggaagtctcggcggggcc
ttgtcaggggcctcccgctccctctcaccgacccgcctgctttccctgcccccggacaag
ccgttcggcgctaaacctctgggcttctggaccaagttcgatgtggctgactggctagag
tggctgggcttggccgaacaccgggcccggttcctggaccacgagatcgatggctcccac
cttcccgccttgaccaaggaggactacgtcgatttgggggtgaccagggtgggacaccgc
atgaacatcgaccgggctctcaagtttttcctggagaggtga
DBGET
integrated database retrieval system
