Capricornis sumatraensis (Sumatran serow): 138096386
Help
Entry
138096386 CDS
T10522
Symbol
CDH1
Name
(RefSeq) cadherin-1 isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04015
Rap1 signaling pathway
csum04371
Apelin signaling pathway
csum04390
Hippo signaling pathway
csum04514
Cell adhesion molecules
csum04520
Adherens junction
csum05100
Bacterial invasion of epithelial cells
csum05200
Pathways in cancer
csum05213
Endometrial cancer
csum05216
Thyroid cancer
csum05218
Melanoma
csum05219
Bladder cancer
csum05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
138096386 (CDH1)
04390 Hippo signaling pathway
138096386 (CDH1)
04371 Apelin signaling pathway
138096386 (CDH1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
138096386 (CDH1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
138096386 (CDH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
138096386 (CDH1)
09162 Cancer: specific types
05226 Gastric cancer
138096386 (CDH1)
05216 Thyroid cancer
138096386 (CDH1)
05218 Melanoma
138096386 (CDH1)
05219 Bladder cancer
138096386 (CDH1)
05213 Endometrial cancer
138096386 (CDH1)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
138096386 (CDH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csum03036
]
138096386 (CDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csum04515
]
138096386 (CDH1)
04090 CD molecules [BR:
csum04090
]
138096386 (CDH1)
Chromosome and associated proteins [BR:
csum03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
138096386 (CDH1)
Cell adhesion molecules [BR:
csum04515
]
Cadherins
Major cadherins
138096386 (CDH1)
CD molecules [BR:
csum04090
]
Proteins
138096386 (CDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
RET_CLD1
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
138096386
NCBI-ProteinID:
XP_068848661
LinkDB
All DBs
Position
20:41675277..41745728
Genome browser
AA seq
883 aa
AA seq
DB search
MGPRCRNLSALLLLLQVSSWLCQEPEPCVPGFGAESYTFTVPRRNLERGRVLGRVSFEGC
AGLPRTGYVSDDTRFKVHTDGLVTVKRPVHLHRPELSFLIHAWDSTHRKLSTKVTLTVSA
HHHHHHRHHDSLSGTQMEVLTFPGSHHGLRRQKRDWVIPPISCPENEKGPFPKSLVQIKS
NKEKETQVFYSITGQGADTPPVGVFIIERETGWLKVTQPLDREHIAKYILFSHAVSSNGQ
AIEEPMEIVITVTDQNDNKPQFTQEVFKGSVLEGALPGTSVMQVTATDIDDDVNTHNAAI
GYKILAQEPMLPHNKMFTINKETGVISVLTTGLDRESFPTYTLMVQAADLNGEGLSTTAT
AVITVLDANDNAPRFDPTTYVGSVPENEANVAITTLTVTDADVPNTPAWEAVYTVLNDNE
KQFIVITDPVTNEGTLKTAKGLDFEAKQQYILYVAVTNVAPFEVTLPTSTATVTVDVIDV
NEAPIFVPPQKKVEVPEDFGVGLEITSYTAREPDTFMEQKITYRIWRDAANWLEINPETG
VISTRAELDREDVEHVKNSTYTALIIATDNGSPAATGTGTLLLFLDDVNDNGPIPEPRAM
DFCQRNPEPHIINIMDPDLPPNTSPFTAELTHGASVNWTIEYNDQERESLILKPKKTLEV
GDHKINLKLIDNQNKDQVTTLDVHVCDCDGIVSNCRKATAYAEAGLQVPAILGILGGVLA
FLILILLLLLLVRRRRVVKEPLLPPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLDAR
PEVTRNDVAPTLMSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGSG
SEAASLSSLNSSESDQDQDYDYLNEWGNRFKKLADMYGGGEDD
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgggccctcggtgccgcaacctctctgcgctcctgctgctgctgcaggtctcatcgtgg
ctctgccaggagccggagccctgcgttcctggctttggcgctgagagttacacgttcacc
gtgccccggcggaacttggagagagggcgagtcctgggcagagtgagttttgaaggatgt
gctggcctaccaaggacaggctatgtttctgacgacacccgattcaaagtgcacacagat
ggcctggttacagtcaaacggcctgtacaccttcatcgtccagagctaagttttcttatc
catgcctgggactccacccacaggaagctctccactaaagtgacactgacggtatcagcg
caccaccatcaccaccaccgtcatcatgactctctctcaggaacccagatggaagtgctc
acatttcctggctcccaccatggtctccggagacagaagagagactgggtcattcctccc
attagctgcccagaaaatgagaaaggcccatttcctaagtcgctggtccagatcaaatct
aacaaggagaaagaaacccaagttttctacagcatcactggccaaggagctgacacaccc
cctgtcggtgtttttattattgaaagagaaacaggatggttaaaagtgacacagcctctg
gatagagaacacattgccaagtacattctcttctctcatgccgtgtcttccaatggacaa
gccattgaagagcccatggagatcgtgatcacggtgaccgaccagaatgacaacaagccc
cagttcacccaggaggtcttcaaggggtctgtcctggaaggtgctcttccaggaacctct
gtgatgcaggtcacggccacagatatagatgatgacgtaaacacccacaatgctgccatc
ggttacaaaatcctagctcaagagcccatgctgccgcacaacaaaatgttcaccatcaac
aaggaaacaggcgtcatcagtgtgctcaccaccgggctggaccgtgagagttttcccaca
tacaccctgatggtccaagcagcagaccttaatggcgaaggcttgagcacaactgcaacg
gctgtgatcacagtcctggacgccaatgataatgctcccagattcgacccgaccacgtac
gtggggtcagtgcctgagaacgaggctaacgtggccatcaccacactcacagtgaccgat
gccgacgttcccaacaccccggcatgggaggctgtttacacagtattaaatgataacgag
aagcaatttatcgtcatcacagacccagtcaccaatgaaggcactctgaaaacagctaag
ggcttggattttgaggccaagcagcagtatatcctgtacgtggcagtgacgaatgtggcc
ccctttgaagtcactctccccacttccacagccaccgtcactgtggatgtgatcgatgtg
aatgaagcccccatatttgtgcctcctcaaaagaaagtggaagtgcccgaggactttggc
gtgggcctggagatcacatcctataccgcccgggagccagacacatttatggaacagaag
atcacatatcggatttggagggacgctgccaactggctggagattaatccggaaacgggt
gtcatttccactcgggctgagttggacagagaggatgtcgagcatgtgaagaacagcacg
tacacggccctcatcatagccactgacaatggttctccagctgccactgggacaggcacc
ctgctcctgttcctcgatgatgtgaatgacaatggccccataccagaaccccgggccatg
gacttctgccagaggaatcccgagcctcacatcatcaacatcatggatcctgatctcccc
ccgaacacctcccccttcacagcagaactgacacatggggcgagtgtcaactggaccatt
gagtacaatgaccaagaacgtgagtctctgattttgaagccgaagaaaaccttagaggtg
ggtgaccacaaaatcaatctcaagctcatagacaaccagaacaaagaccaggtgactaca
cttgatgtgcacgtgtgtgactgtgatgggatcgtcagcaactgcaggaaggccacggcc
tatgccgaagcaggattgcaagttcccgccatcctggggatcctcggaggcgtccttgct
tttctgatccttattctgctgcttctgctacttgttcggaggagaagggtggtcaaagag
cccttactgcccccagaagacgacacccgggacaatgtatattactatgatgaagaagga
ggtggagaagaagaccaggactttgacttgagccagttacataggggcctggatgctcgt
cctgaagtgactcgcaatgacgtggcaccaaccctcatgagtgtgccccagtaccgaccc
cgccctgccaatcctgatgaaatcggaaactttattgatgaaaacctgaaggcagctgat
agtgaccccactgccccaccctatgactctctgctggtgtttgattatgaaggaagtggt
tccgaagctgctagtctgagctccctgaactcctcagagtcagaccaagaccaggactat
gactacctgaatgaatggggcaatcgcttcaagaagctggcggacatgtatggaggcggc
gaggatgactaa
DBGET
integrated database retrieval system
