Capricornis sumatraensis (Sumatran serow): 138096500
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Entry
138096500 CDS
T10522
Symbol
DDX19A
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03013
Nucleocytoplasmic transport
csum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138096500 (DDX19A)
03015 mRNA surveillance pathway
138096500 (DDX19A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138096500 (DDX19A)
Enzymes [BR:
csum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138096500 (DDX19A)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
138096500 (DDX19A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
WHD_Fungal_DR
Motif
Other DBs
NCBI-GeneID:
138096500
NCBI-ProteinID:
XP_068848828
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All DBs
Position
20:complement(7542754..7561202)
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AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSMSNLQIKEEKVKPDTNGVIKTNATPEKTDEEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLCLSPTYELALQTGKV
IEQMGKFHPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREE
ETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQAHFNKKIARLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggcagtggacgagcaggaagcggctgtcaagtcgatg
agtaatttgcagattaaggaagaaaaagtcaaaccagataccaatggtgttatcaaaacc
aatgccactccagagaaaacagatgaagaagagaaagaggacagagccgcccagtcctta
ctcaacaagctgatcagaagcaaccttgtcgataacaccaaccaagtggaagtcctgcag
cgggatcccaactccccactctactcagtcaagtccttcgaggagctgcggctgaaacca
cagcttctccagggagtctatgccatgggcttcaatcggccatccaagatacaagagaat
gcgttacccatgatgcttgctgagcccccgcagaacctgattgcccagtcgcagtcgggt
actggtaaaacggctgccttcgtcctggccatgctcagccgggtggagccagcagagagg
tacccacagtgtctgtgcctctccccgacgtacgagctggcgctccagacaggaaaagtg
attgaacaaatgggcaaatttcatccagaactaaagcttgcttatgctgttcgaggcaat
aaattggaaagaggtcagaaaatcagtgagcacattgtcattggcaccccggggaccgtt
ctggactggtgctccaagctcaagttcatcgaccccaagaagatcaaggtgtttgttctg
gacgaggctgacgtgatgatagccactcagggccaccaagatcagagcatccgcatccag
aggatgctgcccaggaactgccagatgctgcttttctctgccacctttgaagactctgtc
tggaaatttgcccagaaagtagtgcccgacccgaacatcatcaaactgaagcgtgaggag
gaaacactggacaccatcaagcagtattacgtcctgtgcaacagcagagacgagaagttc
caggccttgtgtaacatctacggggccatcaccattgctcaagccatgatcttctgccat
acccgcaaaacagctagctggctggctgcggagctctcaaaagaaggccaccaggtggct
ctgctgagcggtgaaatggtggtggagcagagggccgcagtgattgagcgcttccgagag
ggcaaagagaaggttctggtcaccaccaacgtgtgcgcccgcgggatcgacgtggagcag
gtgtctgtcgtcatcaactttgacctcccggtggacaaggacgggaacccggacaacgag
acctacctgcaccggatcgggcgcaccggccgctttggcaagcggggcctggcggtgaac
atggtggacagcaagcacagcatgaacatcctgaacaggatccaggcgcacttcaataag
aaaatagcaagactggacacggatgacttggacgagattgagaagatagccaactga
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