Capricornis sumatraensis (Sumatran serow): 138097416
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Entry
138097416 CDS
T10522
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03082
ATP-dependent chromatin remodeling
csum05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138097416 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
138097416 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csum03036
]
138097416 (SS18)
Chromosome and associated proteins [BR:
csum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138097416 (SS18)
GBAF(ncBAF) complex
138097416 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
138097416
NCBI-ProteinID:
XP_068849661
LinkDB
All DBs
Position
21:33384868..33455307
Genome browser
AA seq
417 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQSMPMGPGGMSPSGPPPPPRAHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHIPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMSMQPNQGPVMHQQPPSQQYNMAQGGGQHYQGQQPPMGMMSQVNQ
GNHMLGQRQIPPYRPPQQGPPQQYSGQEDYYGEQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNTQYGQQQDAYQGPPPQQGYPPQQQYPGQQGYPGQ
QQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcgttcgcggccccgaggcagcgcggcaagggggagatcactcccgccgcg
attcagaagatgctggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcaacagatgctgcataccaacttggtctac
cttgctacaatagcagattctaatcagaacatgcagtctctcttaccagcaccacccaca
cagagtatgcctatgggtcccggagggatgagtccgagcggccctcccccacctccgcgc
gctcacaacatgccttcagatggaatggtaggtgggggtcctccggcaccacacatgcag
aaccagatgaacggccagatgcctgggcccaaccatatccctatgcagggacctggaccc
aatcaacttaatatgacaaacagttccatgaacatgccttcaagtagccacgggtccatg
ggaggttacaaccattccgtgccgtcatcccagagcatgccggtacagaaccagatgacc
atgagtcaagggcagcccatgggaaactacggccccagaccaaatatgagtatgcaacca
aaccaaggtccagtgatgcaccagcagcctccttctcaacagtacaacatggcccaggga
ggtgggcagcattaccaaggccagcagccaccaatgggaatgatgagtcaagttaaccaa
ggcaatcatatgctgggtcagaggcagatccctccctatagaccacctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaacagtacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaatacgcagtatggccaacagcaagatgcctaccaaggaccacct
ccccagcagggctacccaccccaacagcagtacccagggcagcaaggctacccaggacag
cagcagggctacggtccttcacagggtggcccaggtcctcagtatcctaactacccacag
ggacaaggtcagcaatatgggggttacagaccggcacagcctggacccccacagccacca
cagcagaggccttatgggtacgaccaggggcagtatggaaactaccagcagtga
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