Chryseobacterium suipulveris: MTP09_01120
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Entry
MTP09_01120 CDS
T08539
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
csup
Chryseobacterium suipulveris
Pathway
csup03030
DNA replication
csup03430
Mismatch repair
csup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTP09_01120
03430 Mismatch repair
MTP09_01120
03440 Homologous recombination
MTP09_01120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csup03032
]
MTP09_01120
03400 DNA repair and recombination proteins [BR:
csup03400
]
MTP09_01120
Enzymes [BR:
csup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTP09_01120
DNA replication proteins [BR:
csup03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MTP09_01120
DNA repair and recombination proteins [BR:
csup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MTP09_01120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UOE41276
LinkDB
All DBs
Position
complement(212822..214045)
Genome browser
AA seq
407 aa
AA seq
DB search
MYSVIDIESNGAGFRKESIIEIAIYRYDGHEITDQFISLVNPQSDITPFVQKLTKISPKM
VKTAPKFHEIAKRVVEITDGTTLVGHNIDFDYRMLRQEFKRLGYEFKINTLDTIPLAKKL
IPEAESYSLGKLVKSLGIPLTDQHRAGGDARATLDLFKVLVTKDKDSEIIQQQFDELNSK
TYLNKVRDLTQDLPAERGIIYFQNSDGKIIYSDFVDDLNKFSKSVFSSKSKRWEKIQGET
EHLSYDLTGNAILAKLMMKTKGLRKRESLPFGLYHKNGKYFAEKISGNREEKPLLKFKSF
TQGLKAVNFINENEQFADPEQLKKQLSLKKRNEMWLSTGRTLGEKSFILFEQGKITAYGF
YEFHTQIQTAKKIRQLKIEVTSPTFDLANDLQLGLLRGDFKIQPLPK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtattcagtaatcgatatagagagcaacggagcgggtttcaggaaggaaagcattatt
gaaatcgcgatttacagatatgatggtcatgaaattaccgaccagtttatctcgctggtc
aatccgcaaagtgatatcacaccttttgtacagaaactgaccaaaatttcgccaaaaatg
gttaaaaccgccccgaaattccacgaaatcgcaaaaagagtcgttgaaattactgacggc
accactttggtcggtcacaacatcgatttcgattacagaatgcttcgacaggaattcaaa
cgattgggttacgaattcaaaatcaatactttagacacgattcctttagccaaaaaactg
attcccgaagcggagagttactctttgggaaaactggtgaaatccttaggaattccatta
accgaccaacacagagcgggaggcgacgcacgcgcaactttggatctgttcaaagttctg
gtaacgaaagacaaagattcggagattatccagcagcagtttgacgagctcaactccaaa
acttacctcaacaaagttcgcgacctcacccaggatttgcctgcagaaagaggaattatc
tattttcaaaactcggatgggaagataatctactctgattttgttgatgatctgaacaaa
ttttcgaaatcggtattcagttccaaatccaaacgctgggaaaaaattcagggtgaaacc
gaacacttaagttacgacctcaccggaaacgcaatcctcgccaaactgatgatgaagacg
aaaggtctgcgaaaacgcgaatcgcttccatttggactttaccacaaaaacggaaaatat
ttcgcagagaagatttcgggcaaccgcgaagaaaaaccgctgctgaaattcaagtcgttt
acacaaggtttaaaagccgttaatttcattaatgaaaacgaacagtttgccgatcccgaa
cagctcaaaaagcaactctctctgaagaagcgaaacgaaatgtggctttcaacgggcaga
actttgggcgagaaatccttcatcctctttgaacaagggaaaattaccgcctatggtttt
tatgaattccatacccagatccagactgcaaaaaaaatcaggcagctgaaaattgaggtc
acttcaccgacatttgatttggcaaatgatttacagctcggacttttacggggagatttt
aaaattcaaccgcttcctaaatag
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