Chryseobacterium suipulveris: MTP09_04515
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Entry
MTP09_04515 CDS
T08539
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
csup
Chryseobacterium suipulveris
Pathway
csup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTP09_04515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csup03019
]
MTP09_04515
03009 Ribosome biogenesis [BR:
csup03009
]
MTP09_04515
Enzymes [BR:
csup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MTP09_04515
Messenger RNA biogenesis [BR:
csup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTP09_04515
Ribosome biogenesis [BR:
csup03009
]
Prokaryotic type
rRNA helicases
MTP09_04515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
UOE41901
UniProt:
A0ABY4BRS9
LinkDB
All DBs
Position
963177..964877
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AA seq
566 aa
AA seq
DB search
MNLFTETNLSPELLKAVGELGFVSPTEIQKQTIPFISSDIRDLIALAQTGTGKTAAFSLP
ILDMIDDGSRKIQLLVLCPTRELCLQITKDIKNYSKYLPNIKTTAVYGGSSIMEQIRSLR
EKPQIIVGTPGRVIDLINRKALDFSEIHWLVLDEADEMLSMGFKDDLETILSETPETKQT
FLFSATMNKEVERISKNYLTKPHRISVGSINEVKKNITHEYYVVGYRHKKEALKRLIDAN
PNQYSIIFCRTRMETQEIADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILVATD
VAARGLDVNSLTHVIHYSLPDDPEVFVHRSGRTGRAGKDGISMALIKPEESRKLKQIKSS
TKIEISEKKIPTGTEIIKAQVGGVFEKLLTEHADFFEFDDQLIPDLSEFSKEELVHKLLQ
FQLRDLALYYKDKNDLAEQKFSEDGRESRRERRDRERDGRRGDRRDRDGGRDGGRDSRRS
RKNSEDMVRFFFNLGKRDHLKKVDMLDIINKATAKSKSRKRPDIGDIEIMEKFSFFEVEK
SFKDEVLRGLPNLKFKGKEMRAEVAN
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttacggagaccaacctaagtcctgaattattgaaggcagttggcgaactg
ggctttgtgagcccaacagaaatccaaaaacagactattccttttatctcttcagatatt
cgcgatctcatcgcacttgcgcaaacaggaacaggcaaaacagcagcattttcgcttccg
attttggatatgattgacgacgggagtcgcaaaatccaattattggtgctgtgtcctaca
agagaactttgtttgcagattaccaaagacattaaaaattactcgaaatacctacccaac
atcaagaccactgcggtttatggtggaagcagcattatggagcaaatccgctcgctgcgc
gagaaaccacagattatcgtgggaactccgggaagggtaatcgacctgatcaacagaaaa
gcgctcgacttttccgaaatccactggctggttttggatgaggcggatgaaatgctgtca
atgggtttcaaagacgatctggaaacaatcttgagcgaaactcctgaaacaaagcagact
tttttattctcggcgacgatgaataaggaggtggaaagaatttctaaaaactatttgact
aagccgcacagaatttctgtgggttcgatcaacgaggttaagaaaaacattacccacgag
tattatgtagttggttaccgacacaaaaaagaggcgctgaaaaggttgatcgatgcgaat
ccgaaccaatattccatcattttctgccgaaccagaatggaaactcaggagattgcagat
ttcctgatgcagaacggttatgcagcagatgcgcttcacggagatctttctcaggcgcaa
cgtgacacggtgatgaagaaattccgtttgaaaaatatcgacattcttgtagcgaccgat
gttgcagcgagaggtttggacgtgaattcattaacccacgttatccactactctttacca
gatgatcccgaagttttcgtgcaccgaagcggaagaacaggaagagcagggaaggacggg
atttcgatggcacttattaaaccagaagaatccagaaagttgaagcagattaaatcttcg
accaagattgagatttctgaaaagaaaatcccaacaggaacggaaattatcaaggcgcaa
gtaggtggagttttcgaaaaattattaacggaacacgcggacttcttcgagttcgatgat
caactgattcctgatttgtcagaattcagcaaagaagagttggtacacaaacttctgcaa
ttccagctgagagatttggcgctttactataaagacaaaaatgatttggcggaacagaaa
ttcagcgaagacggtagagaaagccgaagagagagaagagaccgagaaagagacggcaga
agaggcgacagaagagaccgtgatggcggaagagacggcggaagagattccagaaggtca
agaaaaaacagcgaggatatggtgagattcttctttaaccttggaaaaagagaccatctg
aagaaagtggatatgctcgacattatcaataaggcgacagcaaaatcaaaatccagaaaa
cgtccggatatcggcgacatcgaaattatggagaaattctctttcttcgaagttgaaaaa
tcgtttaaggatgaggttttgagaggtttgcccaacctgaaattcaaaggaaaagagatg
cgcgcagaagttgcgaattaa
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