Chryseobacterium suipulveris: MTP09_05590
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Entry
MTP09_05590 CDS
T08539
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
csup
Chryseobacterium suipulveris
Pathway
csup03030
DNA replication
csup03430
Mismatch repair
csup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTP09_05590 (holA)
03430 Mismatch repair
MTP09_05590 (holA)
03440 Homologous recombination
MTP09_05590 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csup03032
]
MTP09_05590 (holA)
03400 DNA repair and recombination proteins [BR:
csup03400
]
MTP09_05590 (holA)
Enzymes [BR:
csup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTP09_05590 (holA)
DNA replication proteins [BR:
csup03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MTP09_05590 (holA)
DNA repair and recombination proteins [BR:
csup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MTP09_05590 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
UOE42109
UniProt:
A0ABY4BSD4
LinkDB
All DBs
Position
1189621..1190658
Genome browser
AA seq
345 aa
AA seq
DB search
MKELDLILKNIKNKELLPIYFFHGEEPYFMDVAVKSFENDVLEEDEKAFNQTVVYGKDTT
YAEVLALARQFPMMGDKQVIILKEAQEIKMTEKEAEALKVYAENPVESTLLVIAHKYKKV
DARKAFAKTLTKNKMLFLSDKMKDYEVPTWIDSEIKNLGLSAKPYIPALLSEYLGTDLSR
ISNELGKLKMILKDSDILDEKVIEANIGISKDFNVFELIKALGKKDEAAAFRIAYYIGKT
PKQNPFVLIVGNLYNFFSNLVVYHTMIGQNPQTVASAMGINPYFVKDFAEASRNYNLKST
TRIISILREIDLKNKGLGAVNMDESELLKEMVYKILNVDKIKVKL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagatttaatcctcaaaaatattaaaaataaagagttattgccgatttat
tttttccatggcgaagaaccgtactttatggatgtggcggtaaagtcctttgaaaacgac
gttttggaggaagacgagaaagcgttcaaccaaaccgtggtttacgggaaagacaccact
tatgcggaagtgctcgctttggcacgccaattcccgatgatgggcgacaaacaggtcatt
atcctaaaagaagcgcaggaaataaaaatgaccgaaaaagaagcagaagcactgaaagtg
tacgcggaaaatcctgtggaatccacattgctcgtcatcgcccacaaatacaaaaaagtc
gatgcaaggaaagcattcgccaaaacattgaccaaaaataagatgctgtttctgagcgac
aaaatgaaggattacgaagtcccgacatggatcgattccgaaattaaaaatctgggatta
agcgcgaaaccctacattccagcgctgctttcagaatatttgggaacggatctttcgaga
atttccaacgagttgggcaagctaaagatgatcctcaaagacagcgatattctcgacgag
aaagtgatagaagccaatatcgggatcagcaaggatttcaatgtcttcgaacttattaaa
gctttagggaaaaaagacgaagccgcggcgtttaggattgcttactacattggcaaaacc
ccgaaacagaacccgtttgtgctgatcgtgggcaacttgtacaactttttttcgaacctc
gtagtttaccacacgatgatcggtcagaatccgcagacagtagcttcagcaatgggcatc
aatccgtactttgtaaaagattttgccgaggcgtcgagaaattacaacctgaaaagcacc
acccgaatcatctccatccttcgcgaaatcgatttgaaaaacaaaggtttgggcgcggta
aacatggacgaaagcgagctcctgaaagaaatggtgtacaaaatcctgaatgtggacaaa
ataaaggtgaagctatga
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