Chryseobacterium suipulveris: MTP09_08105
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Entry
MTP09_08105 CDS
T08539
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
csup
Chryseobacterium suipulveris
Pathway
csup03030
DNA replication
csup03430
Mismatch repair
csup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTP09_08105 (dnaE)
03430 Mismatch repair
MTP09_08105 (dnaE)
03440 Homologous recombination
MTP09_08105 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csup03032
]
MTP09_08105 (dnaE)
03400 DNA repair and recombination proteins [BR:
csup03400
]
MTP09_08105 (dnaE)
Enzymes [BR:
csup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTP09_08105 (dnaE)
DNA replication proteins [BR:
csup03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MTP09_08105 (dnaE)
DNA repair and recombination proteins [BR:
csup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MTP09_08105 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
T2SSK
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UOE39889
UniProt:
A0ABY4BL28
LinkDB
All DBs
Position
complement(1703791..1708449)
Genome browser
AA seq
1552 aa
AA seq
DB search
MFLIFDTETTGLPKNFNAPLSDSENWPRMVQIAWQLHDKDGNLLENQDYIIKPEGYDIPF
NAARIHGISTKIAMEEGRDLAEVLEEFREVLKKVQVVVGHNIDFDYKIVGAEFFRKEIEN
TLEAIPTADTMELGTEFCQLPGGKGGKYKSPKLEELYQKLYGEKFDEAHNAAADVNATAQ
IFFEMMRIGIIPASSLKITESELQEFIKAHPNPIKPFGIVIRRQVAESKEKKTVDFGDTD
EVEIGDYFNFHNHSIYSSLQASSHLHELLEKAERNNFPAVGLVDLGNMMGAFKFVSEIES
WNKDCKKFNETYEQEKDVERTPDKEKDFLKNKEKFLGKKHDFIPVIGCEFYLSDRPEQKQ
FTKDDPDRRTNVVLLAKNFDGYRNLAKLSSFGFVNGFYFGVPRISKKMIAEYKEGLIALT
AGTAGDVPNTILEFGEQKGEEVFKWWKETFGEDFYVQIQNHEVEEEEHLNDVLLEFADKY
GVKILAQNETFYTEKADANIQDILYCIKDGEKLSTPVGKGFGKRRALPTNEFYIKDEQEL
KQTFRNYPDAFEAYTEFLAKFERYTLKRDVLLPEFAIPEEFKDEQDEADNGKRGENAYLR
HLTYEGAARRYSEITAEIRERLDFELEVIANTGYPGYFLIVQDFCNEARKMGVWVGPGRG
SAAGSAVAYCTGITNVDPIKYDLLFERFLNPERVSMPDIDIDFDDEGRDKIIKWVVDKYG
KNNVAQIITYSVLGGKSAIKDAGRVLDVSIPETNNIAKLVPSIPGMNIAKAFSKFEKLAP
EDKVLVQEMKDILANPDDGRYEVLSSAQKMEGCIRNTGIHACGVIITPEDISNLVPITTA
AKDADILVSQFDNSVAENAGLLKMDFLGLRTLTIIKHAIKLIKQRHGIDIDPDKIPLTDS
KTFQLFQEGRTVGIFQYESPGMQKYMRELKPTEFADLIAMNALYRPGPIKYIPSFINRKH
KIEETLFDLPETEEYLGETYGITVYQEQVMLLSQKLANFTKGEADNLRKAMGKKQRDVLD
KMYPKFIEGGKSNNLDEEKLNKIWKDWEAFAEYAFNKSHSTCYALIAYQTAYLKANYPAE
YMASVMSNNINNTKQITMFMEDCKSIGVDVLGPDVNESQYEFAVNDKGQIRFGLGAIKGI
GEGPSEAIVEARKTERFKNIYDFFEKVPYSQINKRVAESLVIAGAFDEVDKYHRAQYFDI
DNAGRTNIERLLRYGQSFQDSKNEIENSLFADFAEEVQIEQPKINPAPEWQNMHKLNREK
EIIGFYLSAHPLDEYKFQYQFIEGALSKKEILEGKKHGGEELEKIVLPVDVSDSDDEIVD
IAVEDLDGEEAMIDEPTKKAEPKGAFNFLNLDEVDAFKESAFPNQPDLFNNDKLSWKEKQ
ALKNNTPEYMVAGMVTEYTVRDGKNSGEKIAFVTLEDYSGSYSFRLGDRDYMRLRDKVDL
QRFVIFKIKFSQSNDGRVFVNVADIIDLKDAFEKFAKKMTVVVDINDLRKQDLDFFISSF
AKNKGEQKLNFYVRNPEDQSVLELMSMKQHIDINGDLLGIFHELQKYKVFLN
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaatcttcgacacggaaaccacgggtttaccaaaaaactttaacgcgccgctg
agcgattccgaaaactggccaagaatggtgcagatcgcttggcaactccatgataaggac
ggaaacctgctcgaaaaccaggactatatcattaaaccggaaggttacgatattcctttc
aatgctgcgagaatccacggaatttctaccaaaatagcgatggaggaagggcgagacttg
gctgaagtgctcgaagaattcagagaggtgctgaaaaaagtgcaggtcgtggtcggtcac
aatatcgacttcgactacaaaatcgtgggtgcagagttttttagaaaagagatcgaaaac
actttagaagcaattcctaccgccgataccatggaactcgggacagagttctgccaactt
cccggcggaaaaggagggaagtacaaatccccaaaactggaggaactgtaccaaaaactc
tatggcgagaaatttgacgaggcacacaacgccgccgccgatgtgaacgccaccgcacag
attttcttcgagatgatgcgaatcgggattattcctgcatcgagcttaaagatcaccgaa
agcgagcttcaggaatttatcaaagcacatccgaatccgattaaaccgttcggaatcgtc
atcagaagacaggttgccgaatcgaaggagaaaaagaccgtcgatttcggcgataccgac
gaggtggaaatcggcgactatttcaatttccacaaccacagtatttactcgtctttgcag
gcatcgtcgcacctccacgaactgctcgaaaaggcggagcgcaacaattttcccgccgtc
ggtttggtggatctgggaaatatgatgggcgcatttaagtttgtttccgaaattgaatca
tggaacaaagactgcaagaagttcaacgaaacctatgagcaggaaaaagatgtagaaaga
actcccgacaaggaaaaggattttcttaaaaataaagaaaaattcctcggcaagaaacac
gacttcatcccagtaatcggctgcgagttctatctttcggaccgccccgaacagaagcag
tttaccaaagacgatcccgaccgcagaaccaatgtggttttactggcaaagaatttcgac
ggctacagaaacctggcgaaactgtcgagttttggattcgtgaacggattctatttcggc
gttcccaggatctctaaaaaaatgattgccgaatataaggagggcttgatcgcattgacg
gccggaactgcgggcgacgtacccaatacgattctcgaattcggtgagcagaaaggggag
gaagtgttcaaatggtggaaagaaacctttggcgaagacttctacgtacagatccaaaac
cacgaggtggaagaggaggaacacctcaacgacgtgctgctcgagtttgccgacaaatac
ggagtgaagattctggcacaaaacgaaaccttctatacagaaaaagccgatgccaatatt
caggacatcctgtattgcatcaaggatggggagaaactttcaaccccggtcggaaaaggt
ttcggaaaacgcagagcacttccgaccaacgaattttatattaaagacgaacaagagctt
aagcagacctttagaaattatcccgacgcttttgaggcatataccgagttcctggcgaag
tttgaacgctacacgctgaagcgtgacgtgctgcttccggagtttgcgattccagaagag
tttaaagatgagcaggatgaagccgacaacggcaaacgcggtgaaaatgcttacctgaga
catttgacctacgaaggcgctgcaagaagatattccgaaatcaccgctgaaatcagggaa
cggctcgacttcgaactggaggttattgccaataccggatatcccggttactttttgatt
gtacaggatttttgcaacgaggcgcgaaagatgggggtttgggtcggtccgggtcgtggt
tctgctgcaggttctgcggtggcgtactgtaccgggattaccaatgtggaccccatcaaa
tacgacctcctttttgagaggttcctgaatccggaaagggtttccatgcccgatatcgat
atcgatttcgacgatgaaggccgcgacaaaatcatcaaatgggtggttgacaaatacgga
aaaaacaatgtggcgcagattattacgtattcagttcttggtgggaaatctgcgattaaa
gatgcaggaagagttttggatgtatcgattcccgaaactaacaatatcgcgaaactggtt
ccctcaattcccggaatgaatatcgcgaaagcattttcgaagtttgagaaactcgctccc
gaagacaaagtgcttgttcaggaaatgaaggacatcctcgccaatcccgacgacggaaga
tacgaagtgctttcctctgcacagaaaatggagggctgcatcagaaacaccggaatccac
gcatgcggagtgatcattacgccagaagatatttcgaacctggtaccgattaccacagct
gctaaagatgccgacattttggtttcgcagtttgacaactctgttgcggaaaacgcggga
ttgctcaaaatggacttcttgggtttaaggactttgaccatcatcaagcacgccatcaaa
cttattaagcaaagacacggaatcgacatcgacccggacaagattccgctcaccgacagc
aaaaccttccaactctttcaggaggggagaacagtaggaatcttccagtacgaaagtcct
ggaatgcagaaatatatgcgggaactgaaaccgaccgaattcgcagatttaattgcaatg
aacgcgctgtacagaccaggtccgattaagtatatcccttcctttatcaacagaaagcat
aagattgaagaaacgctctttgacctaccggaaaccgaagaatatctcggcgaaacctac
ggaattaccgtttatcaggagcaggtaatgctgctttcgcagaagctcgccaactttacc
aaaggcgaagccgacaacctgagaaaggcgatgggtaagaaacagagagacgtgctggac
aagatgtacccgaagtttatcgaaggtggaaaatccaacaacctggatgaagagaagctg
aacaaaatctggaaagactgggaagcttttgcggaatacgccttcaacaaatcgcactcc
acctgttacgcgctgatcgcctaccaaactgcctatcttaaagcaaactatcccgcagaa
tatatggcgagtgtgatgagcaacaacattaacaataccaagcagatcacgatgtttatg
gaggactgcaaaagtattggtgtggatgttttgggtcccgacgtcaacgaatcgcagtat
gaatttgcggtgaacgataaaggacagatccgcttcggattgggcgccatcaagggaatt
ggcgaaggtccaagtgaagccattgtagaggcacgaaaaacggaaagattcaaaaatatc
tacgacttcttcgagaaagttccatattctcaaatcaataaaagggttgccgaaagtttg
gtgattgcaggtgctttcgacgaggttgataaataccaccgcgcacaatatttcgacatc
gacaatgcgggaagaaccaatatcgagcgtctccttcgttatggtcaaagctttcaggac
agcaagaatgaaatagaaaactcgctgtttgccgattttgccgaggaagtgcaaatcgag
cagcccaaaataaaccccgctccggaatggcagaatatgcacaaactcaaccgtgaaaag
gaaatcatcgggttctatctttcggcacatccgctggatgagtataaattccagtaccag
tttatcgaaggtgcattaagcaaaaaggaaatcctggaagggaagaagcacggcggtgaa
gagcttgaaaaaatagtcctcccggtagatgtttctgattccgacgacgagatagtggat
atcgcagtcgaagatttggatggggaagaagcaatgatcgatgagccgactaaaaaggca
gagccgaaaggagctttcaattttctgaatctggatgaggtggatgctttcaaggaatcc
gctttcccgaatcagcccgaccttttcaacaacgataaactttcgtggaaggagaaacag
gcgcttaaaaataatactcccgaatatatggtcgcaggaatggtgaccgaatacacggtg
cgcgacggcaaaaacagcggcgagaaaatcgcattcgtaaccctcgaagattacagcggc
agttatagtttccgtttgggagaccgcgactatatgcggcttcgcgataaggttgacctg
cagcggttcgttattttcaagatcaagttttcccaatcgaatgacggaagagtgttcgta
aatgttgcggatattatcgatctgaaagacgccttcgagaagtttgccaagaaaatgacg
gtggttgttgatattaatgatcttcgaaaacaagacctggatttcttcatcagcagtttc
gccaaaaacaagggagagcagaagctgaatttctacgtgcgaaatcctgaagaccagtcg
gtactcgaactcatgtcgatgaagcagcatatcgacatcaatggtgatttgctgggaatt
ttccacgaactgcagaagtataaggtgtttttgaattaa
DBGET
integrated database retrieval system
