Chryseobacterium suipulveris: MTP09_14165
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Entry
MTP09_14165 CDS
T08539
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
csup
Chryseobacterium suipulveris
Pathway
csup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTP09_14165 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csup03021
]
MTP09_14165 (rho)
03019 Messenger RNA biogenesis [BR:
csup03019
]
MTP09_14165 (rho)
Transcription machinery [BR:
csup03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MTP09_14165 (rho)
Messenger RNA biogenesis [BR:
csup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MTP09_14165 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA_25
AAA_22
AAA
Rho_N
TFIIA
Motif
Other DBs
NCBI-ProteinID:
UOE41027
UniProt:
A0ABY4BS56
LinkDB
All DBs
Position
complement(2987461..2989245)
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AA seq
594 aa
AA seq
DB search
MFNIETLRSKSASDLAKITRDLGVKLAKNSTDNDKIFAILDFQASNTKVAKDYYNATETP
MNTEENTAPEIKKPAPKKPAPRKKTEKPTEVSSEIPFENNETEPVAEVPAEKPKAETAAA
NPASANQQKKKRQRIQPTKSAEAQVENTAETTEVSEPQKETETAENSRTPQNQNGNGHQN
GNQQGNQNRNQQNKNQNKNQNPNQNKNQNQNSDSAEEPKKEYNFDGLVTIEGVLEILPDN
YGFLRSSDFSYISSPDDVYVSTNQIRNYGLKTGDTVRGIVRLPKEGEKYFSLLKPTEVNG
RDLEFIKDRVAFEFLTPLFPDEKFNLTGRNSTLSTRIVDLFTPIGKGQRAMIVAQPKTGK
TMLLKDIANSISANHPEAYMMILLIDERPEEVTDMERSVNAEVIASTFDEPAEKHVKVAN
LVLSKAQRMVECGHDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHKPKRFFGAA
RNIEGGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRKIANKRIYPAIDLVASS
TRRDDLLLDDTTQQRMWILRKYLADMNPVEAMEFVNKSIKGTINNEEFLMSMNK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacatcgaaacgttaaggtcgaaatccgcttcggatttggccaaaattacgaga
gatttaggcgttaaactggctaaaaacagtaccgataatgacaaaatctttgcgattcta
gactttcaggcatcgaacacgaaagtagcaaaagattattacaacgccacagaaacccct
atgaatacagaagaaaataccgctcctgaaataaagaaacctgcgccgaaaaaacctgcg
ccaagaaagaaaaccgaaaaaccaacagaggtttcatcagaaattcctttcgagaataat
gaaactgagccagtagcagaagttccagccgagaaaccaaaagcagaaacagcagctgcg
aatccggcttccgcaaaccagcaaaaaaagaagagacaacggattcagccaacaaaatcg
gcggaagcacaagttgaaaatactgcagaaacaacagaagtttctgaaccacaaaaggaa
actgaaactgcggaaaacagcagaaccccacaaaaccaaaacggaaacggtcaccagaac
ggaaaccaacaaggaaaccagaaccgcaaccagcaaaacaaaaaccagaacaaaaatcag
aatccgaaccagaataagaatcaaaaccaaaacagcgattccgctgaagaaccgaaaaag
gaatacaacttcgacggtttggtaacaatcgagggggtgctcgaaatccttcccgataac
tacggattccttcgttcatcggatttctcgtacatctcatcacctgatgacgtgtatgtt
tcaaccaaccagattagaaattatggactcaaaaccggtgacacggtaagaggaatcgtt
cgtttaccaaaagaaggtgagaaatatttttctttgttaaagccgacagaagttaacggc
cgtgatctggaattcatcaaagacagagtggctttcgagtttttgacgccgctttttcct
gatgaaaaatttaatttgacaggtagaaactctacgctctcaacaagaattgtggatctc
tttacccctatcggaaaaggacagcgagcaatgatcgttgcacaaccgaaaacaggtaag
accatgcttctgaaagatatcgcaaactccatttcagccaaccatccggaagcgtatatg
atgatcctgctcatcgacgaaagaccggaagaagtaaccgatatggaaagaagcgtgaat
gcagaagtaatcgcatcgacgttcgacgaacccgcagaaaagcacgtgaaagtggcaaac
ctcgtcctctccaaagcgcaaagaatggtggaatgcggtcacgatgtggtgatcctgctc
gactcgattacacgtttggcgagagcttacaatacggtaactccggcatcaggaaagatt
ttgtcgggaggtgttgacgcaaacgcactccacaaaccaaaaagatttttcggagcggca
agaaatatcgaaggtggcggttcattaacaattatcgcaaccgctttgatcgacaccggc
tccaagatggacgaggtgattttcgaggaattcaaaggaacgggaaatatggaacttcag
ctggacagaaagattgcgaacaaaaggatttatcctgcgatcgatttggtggcttcgagt
accagaagagacgacctgcttttggatgacaccacacaacagagaatgtggatcctgcga
aaatatcttgcagatatgaatcctgtagaggcaatggaatttgtgaacaagagcatcaag
ggaaccattaataatgaggagttcttgatgtcgatgaataagtag
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