Corynebacterium suranareeae: N24_1025
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Entry
N24_1025 CDS
T07007
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
csur
Corynebacterium suranareeae
Pathway
csur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N24_1025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csur03019
]
N24_1025
03400 DNA repair and recombination proteins [BR:
csur03400
]
N24_1025
Enzymes [BR:
csur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N24_1025
Messenger RNA biogenesis [BR:
csur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N24_1025
DNA repair and recombination proteins [BR:
csur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N24_1025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_Cmi2_C
TOR1L1_N
Motif
Other DBs
NCBI-ProteinID:
BAU95287
UniProt:
A0A160PN23
LinkDB
All DBs
Position
1105240..1107291
Genome browser
AA seq
683 aa
AA seq
DB search
MNATREEANNLLAGIAGPGAQLRDDQWVAIDALVNQRKRMLVVQRTGWGKSAVYFIAAKL
LRARGAGAAVIISPLLALMRNQVASAERAGIKAATLNSANMTEWEAIQQQVVSGDADVLL
ISPERLNNPDFRDTILPRLAAETGLVVVDEAHCISDWGHDFRPDYRRIRDLLAGLAPNIP
VLATTATANDRVVEDVRAQLGEGTGLLRGGLDRESLYLSVVNLPNPTERPAWLATHLKEL
AGSGIIYCLTVSAAHDLADALNSVGWNVAAYTGRTEAGERERLEHALINNEIKALVATSA
LGMGFDKPDLGFVVHMGSPSSPVSYYQQIGRAGRGTDRADVILLPGTEDKEIWEYFASVS
FPREEVVRQLLAVLTDEAQSTVRLEAQVDLSRSRLEQVLKVLDVDGAVKRVRGGWVSTGQ
EWIYDAERYAGLEQARKTEQQSMVDYQNTTDCRMLYLRRELDDAEATTPCGRCDNCTGKT
WGLDTDAEITLKVDQQLQTPGVSIAPRKMWPTGISVKGKIAGLEEGRALGRLNDIARGPA
LKALLDSRAYSDDPWMAHIIEVLKNWDWSNRPANVAALGNTNSASTEMIIQVAQSIASVG
RMNFAGILPVLPGAEEVMAQNSAYRVEALLKQWDWSKGLQLVPGPILLVTDLIDTGWSVT
VAGNGIAQRTSESVLPFALASRG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaacgagagaagaagccaacaacttactagctggaattgccggtcctggtgca
cagctgcgcgatgatcaatgggtagcaattgatgctttagtaaaccaacgcaaacgcatg
ctggtagtccaaagaaccggttggggaaaatcagccgtttacttcatcgcagccaaactg
cttcgcgctcgaggtgctggcgcagcagttattatttctccactgcttgcactgatgcgt
aaccaggttgcctcagctgagcgtgcgggtattaaagcagcaacactaaatagtgccaac
atgacggaatgggaagccatccagcagcaagtcgtttcaggtgatgctgatgtgctactg
atttcacccgaacgcctcaacaaccctgactttagagatactattttgcctcggttagca
gctgaaacaggcttggttgtggtcgatgaagcgcactgtatttcagactggggccatgat
ttccgccccgattatcgccgtatccgcgaccttttagcaggacttgcgcctaatattcca
gtgcttgcaaccaccgctaccgcgaatgaccgcgtggtagaagatgtccgcgcgcaatta
ggtgagggcacaggtttgcttcgtggtggactagaccgagaatctctatacctttccgtg
gtgaatctcccgaaccccaccgaacgtccagcctggcttgccacccacctcaaagaactg
gctggctcaggcattatttactgtctgacagtatccgcagcacatgatcttgctgatgca
ctcaattctgttggctggaacgttgccgcatacactggtcgaaccgaagcaggagagcgc
gagcgattagaacatgctttgatcaacaatgagatcaaagcattagtggcaacctccgca
cttggcatgggctttgacaagccagatctaggttttgtggtgcacatgggaagccccagc
tcaccggtgtcttattaccagcagattggtcgcgccgggcgtggcactgaccgtgctgat
gtcatcttgctgccaggtactgaagacaaagagatctgggaatattttgcatcagtatct
ttcccacgtgaagaagttgtccgccaactacttgcagttttaaccgatgaagcacaatcc
accgtcagattagaagcacaagtcgatctttcccgctcacgacttgagcaagtactaaag
gtgctcgacgttgatggagcagtcaaacgcgtgcgcggtggctgggtgtctaccgggcaa
gagtggatctacgatgctgagcgctatgcagggcttgaacaagctaggaaaactgagcaa
caaagcatggtggattatcaaaacaccactgattgccgcatgctgtatctccgcagagaa
ctagacgacgcggaagcaaccaccccttgtggccgctgcgacaactgcacgggcaaaacc
tggggacttgataccgatgctgagatcaccttgaaggtagatcaacagcttcaaacacct
ggtgtgagcattgcaccacgaaaaatgtggcccactggaatcagcgtgaaaggtaaaatc
gcagggctggaagagggacgagctttgggtcgacttaacgatatcgcgcgaggacccgca
cttaaggctttgttagacagcagagcttattctgatgatccatggatggcacacatcatt
gaggtgctgaaaaactgggattggagcaacagaccagccaacgtagcagcactcggcaac
accaacagtgcatctacggagatgattatccaggtagctcaatcaatcgccagcgttgga
cgtatgaactttgcaggtatactcccggtcctgccaggtgctgaggaagtgatggcgcaa
aactccgcataccgagttgaagccctgttgaaacaatgggattggtcaaaaggcctgcaa
ctagttccgggacccattttgttggtgacagatctaattgacactggctggtccgtgaca
gttgcaggaaatggcatagcgcaaagaacttcagagagtgttttgccgtttgccctagct
agcaggggataa
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