Entry |
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Name |
(GenBank) ATP-dependent DNA helicase
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KO |
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Organism |
csur Corynebacterium suranareeae
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:csur00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N24_1025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csur03019]
N24_1025
03400 DNA repair and recombination proteins [BR:csur03400]
N24_1025
Enzymes [BR:csur01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N24_1025
Messenger RNA biogenesis [BR:csur03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N24_1025
DNA repair and recombination proteins [BR:csur03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N24_1025
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1105240..1107291
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AA seq |
683 aa
MNATREEANNLLAGIAGPGAQLRDDQWVAIDALVNQRKRMLVVQRTGWGKSAVYFIAAKL
LRARGAGAAVIISPLLALMRNQVASAERAGIKAATLNSANMTEWEAIQQQVVSGDADVLL
ISPERLNNPDFRDTILPRLAAETGLVVVDEAHCISDWGHDFRPDYRRIRDLLAGLAPNIP
VLATTATANDRVVEDVRAQLGEGTGLLRGGLDRESLYLSVVNLPNPTERPAWLATHLKEL
AGSGIIYCLTVSAAHDLADALNSVGWNVAAYTGRTEAGERERLEHALINNEIKALVATSA
LGMGFDKPDLGFVVHMGSPSSPVSYYQQIGRAGRGTDRADVILLPGTEDKEIWEYFASVS
FPREEVVRQLLAVLTDEAQSTVRLEAQVDLSRSRLEQVLKVLDVDGAVKRVRGGWVSTGQ
EWIYDAERYAGLEQARKTEQQSMVDYQNTTDCRMLYLRRELDDAEATTPCGRCDNCTGKT
WGLDTDAEITLKVDQQLQTPGVSIAPRKMWPTGISVKGKIAGLEEGRALGRLNDIARGPA
LKALLDSRAYSDDPWMAHIIEVLKNWDWSNRPANVAALGNTNSASTEMIIQVAQSIASVG
RMNFAGILPVLPGAEEVMAQNSAYRVEALLKQWDWSKGLQLVPGPILLVTDLIDTGWSVT
VAGNGIAQRTSESVLPFALASRG |
NT seq |
2052 nt +upstreamnt +downstreamnt
atgaacgcaacgagagaagaagccaacaacttactagctggaattgccggtcctggtgca
cagctgcgcgatgatcaatgggtagcaattgatgctttagtaaaccaacgcaaacgcatg
ctggtagtccaaagaaccggttggggaaaatcagccgtttacttcatcgcagccaaactg
cttcgcgctcgaggtgctggcgcagcagttattatttctccactgcttgcactgatgcgt
aaccaggttgcctcagctgagcgtgcgggtattaaagcagcaacactaaatagtgccaac
atgacggaatgggaagccatccagcagcaagtcgtttcaggtgatgctgatgtgctactg
atttcacccgaacgcctcaacaaccctgactttagagatactattttgcctcggttagca
gctgaaacaggcttggttgtggtcgatgaagcgcactgtatttcagactggggccatgat
ttccgccccgattatcgccgtatccgcgaccttttagcaggacttgcgcctaatattcca
gtgcttgcaaccaccgctaccgcgaatgaccgcgtggtagaagatgtccgcgcgcaatta
ggtgagggcacaggtttgcttcgtggtggactagaccgagaatctctatacctttccgtg
gtgaatctcccgaaccccaccgaacgtccagcctggcttgccacccacctcaaagaactg
gctggctcaggcattatttactgtctgacagtatccgcagcacatgatcttgctgatgca
ctcaattctgttggctggaacgttgccgcatacactggtcgaaccgaagcaggagagcgc
gagcgattagaacatgctttgatcaacaatgagatcaaagcattagtggcaacctccgca
cttggcatgggctttgacaagccagatctaggttttgtggtgcacatgggaagccccagc
tcaccggtgtcttattaccagcagattggtcgcgccgggcgtggcactgaccgtgctgat
gtcatcttgctgccaggtactgaagacaaagagatctgggaatattttgcatcagtatct
ttcccacgtgaagaagttgtccgccaactacttgcagttttaaccgatgaagcacaatcc
accgtcagattagaagcacaagtcgatctttcccgctcacgacttgagcaagtactaaag
gtgctcgacgttgatggagcagtcaaacgcgtgcgcggtggctgggtgtctaccgggcaa
gagtggatctacgatgctgagcgctatgcagggcttgaacaagctaggaaaactgagcaa
caaagcatggtggattatcaaaacaccactgattgccgcatgctgtatctccgcagagaa
ctagacgacgcggaagcaaccaccccttgtggccgctgcgacaactgcacgggcaaaacc
tggggacttgataccgatgctgagatcaccttgaaggtagatcaacagcttcaaacacct
ggtgtgagcattgcaccacgaaaaatgtggcccactggaatcagcgtgaaaggtaaaatc
gcagggctggaagagggacgagctttgggtcgacttaacgatatcgcgcgaggacccgca
cttaaggctttgttagacagcagagcttattctgatgatccatggatggcacacatcatt
gaggtgctgaaaaactgggattggagcaacagaccagccaacgtagcagcactcggcaac
accaacagtgcatctacggagatgattatccaggtagctcaatcaatcgccagcgttgga
cgtatgaactttgcaggtatactcccggtcctgccaggtgctgaggaagtgatggcgcaa
aactccgcataccgagttgaagccctgttgaaacaatgggattggtcaaaaggcctgcaa
ctagttccgggacccattttgttggtgacagatctaattgacactggctggtccgtgaca
gttgcaggaaatggcatagcgcaaagaacttcagagagtgttttgccgtttgccctagct
agcaggggataa |