Chromobacterium subtsugae: U6115_01290
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Entry
U6115_01290 CDS
T11179
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
csut Chromobacterium subtsugae
Pathway
csut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U6115_01290 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csut03400
]
U6115_01290 (ung)
Enzymes [BR:
csut01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
U6115_01290 (ung)
DNA repair and recombination proteins [BR:
csut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U6115_01290 (ung)
Prokaryotic type
U6115_01290 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WSE91902
LinkDB
All DBs
Position
complement(267821..268543)
Genome browser
AA seq
240 aa
AA seq
DB search
MQALNYLSSALARVHPAWEAVLRQADIAARLADIDRQLSQQSEAGKTLFPPAAQIFNALS
FASPADVKVVILGQDPYHGAGEAMGLSFSVPEGVRVPPSLRNIYKELAADLGLGIPANGD
LSHWAQQGVLLLNSVFTVEQDQAGSHGKLGWQTVSDALIDAVNAQSPGCVFLLWGNWAHT
KAERIDASRHLALKAAHPSPLSASRGFHGCRHFSQVNAWLIARGRQPVRWAAAAAQNSLF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctctgaattatctttcctccgccctcgcccgcgtccatccggcctgggaagcg
gtgctgcgccaagccgacatcgccgcgcggctggccgacatcgaccgccagctgagccag
caaagcgaggccggcaagacgctgttcccgcccgcggcgcagatcttcaacgcgctcagc
ttcgcgtcgccggccgacgtcaaggtggtgatcctgggccaggacccgtaccacggcgcc
ggcgaagcgatggggctgtcgttttcagtgccggaaggcgtgcgcgtgccgccgtccttg
cgcaacatctacaaggaactggcggccgacctgggcctgggcattcccgccaacggcgat
ctcagccactgggcgcagcaaggcgtattgctgctcaacagcgtgttcaccgtcgagcag
gaccaggccggcagccacggcaagctgggctggcagacggtcagcgacgcgctgatcgac
gccgtcaacgcgcaaagccccggctgcgtgttcctgctatggggcaactgggcgcacacc
aaagccgagcgcatcgacgccagccgccacctggcgctgaaggccgcccatccgtcgccg
ctgtcggccagccgcggcttccacggctgccgccatttctcccaagtcaacgcctggctg
atcgcccgcggccgccagccggtgcgctgggccgccgccgccgcgcaaaacagcctgttc
tga
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