Chromobacterium subtsugae: U6115_02265
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Entry
U6115_02265 CDS
T11179
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
csut Chromobacterium subtsugae
Pathway
csut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U6115_02265 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csut03019
]
U6115_02265 (recQ)
03400 DNA repair and recombination proteins [BR:
csut03400
]
U6115_02265 (recQ)
Enzymes [BR:
csut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U6115_02265 (recQ)
Messenger RNA biogenesis [BR:
csut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
U6115_02265 (recQ)
DNA repair and recombination proteins [BR:
csut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
U6115_02265 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
T4SS-DNA_transf
DUF5614
DUF6575
Motif
Other DBs
NCBI-ProteinID:
WSE92092
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All DBs
Position
462274..464073
Genome browser
AA seq
599 aa
AA seq
DB search
MHDAVSILNHVFGYPEFRGQQQEIVEQVAHGGHALVLMPTGGGKSLCYQIPALLRDGVAI
VVSPLIALMQDQVATLQELGVAAACLNSATSPEEARDIARQARAGTLDLLYVAPERLLTT
RFLEFMSSLNIALFAIDEAHCVSHWGHDFRPEYQQLGLLAERFPQVPRIALTATADEQTR
LDIIHYLKLAEARVFLSSFDRPNLFYQVVEKHNAKKQLLDFIRQEHQGATGIVYCLSRKR
VEDTAQWLCDNGIEALPYHAGLSHAQREAHQRSFLREDGIVMVATVAFGMGIDKPDVRFV
AHIDMPKSPENFYQESGRAGRDGLPSASWLCYGLNDVVQLRQMIEGGEMAELQKQVELSK
LDAMLAFCETAGCRRQHILAHFGEDSRPCGHCDNCLHPPITYDATEPVRKLLSCIYRVGQ
RFPTGHVIDVLLGRQSPSIGHHRHDQLSTYGIGKDMNQRWWRSIVRQLVARQLVQVDIAR
GQSLVLTDACRPLLKGEESIYLRPLADEKKSRGSAAADRWLRTEREERLWQALRRWRRQV
ADEHNVPAYAVFSDRTLRDLVEKRPDSPAGLRHIHGLGELKLARYGEALLQCLSEAQQA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgcagtctccatcctcaatcatgttttcggctacccggaattccgcgggcag
cagcaggagatcgtcgagcaagtcgcgcatggcggccacgcgctggtgctgatgcccacc
ggcggcggcaagagcctgtgctaccagattccggcgctgctgcgcgacggcgtggccatc
gtggtgtcgccgctgatcgcgctgatgcaggaccaggtggccaccttgcaggagctgggc
gtggccgcggcctgcctgaactccgccacctcgccggaagaggcgcgcgacatcgcccgc
caggcccgcgccggcacgctggacctgttgtacgtggcgccggagcgcttgctgacgacg
cgtttcctggaattcatgtccagcctgaacatcgcgctgttcgccatcgacgaggcgcac
tgcgtcagccactggggccatgatttccgtcccgaatatcagcagttgggcttgctggcc
gagcgcttcccgcaagtgccgcgcatcgcgctgaccgccaccgccgacgaacagacccgg
ctcgacatcatccattatttgaagctggccgaggcgcgggtattcctgtccagtttcgac
cgtcccaacctgttttaccaggtggtggaaaagcacaacgccaaaaagcagctgctggac
ttcatccgccaggagcaccagggggccaccggcatcgtctactgcctgtcgcgcaagcgg
gtggaggacaccgcgcagtggctgtgcgacaacggcatcgaagcgctgccctaccatgcc
ggcctcagccacgcccagcgcgaggcgcaccagcgcagcttcctgcgcgaggatggcatc
gtgatggtggccaccgtcgccttcggcatgggcatcgataaacccgacgtgcgtttcgtc
gctcacatcgacatgcccaagagcccggaaaacttctaccaggagtccggccgcgccggc
cgcgacggcctgccgtcggccagttggctgtgctacggcctcaacgacgtggtgcagctg
cggcagatgatagaaggcggcgagatggccgagctgcagaaacaggtggagctgtccaag
ctggatgcgatgctggccttctgcgaaaccgccggctgccgccgccagcacatcctcgcc
cacttcggcgaggacagccgcccctgcggccattgcgacaattgtctgcacccgcccatc
acttatgacgccaccgaaccggtgcgcaagctgttgtcctgcatttatagagtggggcaa
cgctttcccaccggccatgtcatcgacgtgctgctggggcggcaaagccccagcatcggc
catcatcgccacgaccagctaagcacttacggcatcggcaaggatatgaaccagcgctgg
tggcgctccatcgtccgccagctggtggcgcgccaactggtgcaggtggacatcgcccgc
ggccagtcgctggtgctcaccgatgcctgccggccgctgctgaagggcgaggaaagcatc
tatctgcgcccgctggccgacgagaagaagtcgcgcggcagcgccgccgccgaccgctgg
ctgcgcaccgagcgcgaggagaggctgtggcaggcgctgcgccgctggcgccgccaggtg
gccgacgagcacaatgtgccggcctacgcggtgttctccgaccgcacgctgcgcgatctg
gtggaaaagcgcccggacagcccggccggcctgcgccatatccacggcctgggcgagctc
aagctggcccgctatggcgaagccttgctgcaatgcctgagcgaggcgcagcaagcctga
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